Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716808
Identifier: 119716808
GI number: 119716808
Start: 2747285
End: 2748277
Strand: Reverse
Name: 119716808
Synonym: Noca_2582
Alternate gene names: NA
Gene position: 2748277-2747285 (Counterclockwise)
Preceding gene: 119716809
Following gene: 119716806
Centisome position: 55.12
GC content: 71.9
Gene sequence:
>993_bases ATGACCAGTGGCGCCTTCGACGAGCTCCACCCCGACGTCCTGGGCGAGGCCTACCTGGCCGAGACCATCGGCCTGCCGCC GGACGAGGAGGGCCCGGTCGTCGCGACCCTCGTCGTACGCCGGGCCGAGCGGCGGACCGGCCGCGCGGTCCTGCACGTCC ACGGGTTCGCGGACTACTTCTTCCAGACCCAGTACGCCGAGTGGTGGAACGAGCGCGGCTACGACTTCTACGCGATCGAC CTGCGCAAGTACGGCCGCTCGATCCGGCCGCACCAGACCCCGAACTACGTGACCGACCTGCGGTCCTACTTCGCCGACCT CGACGCGGCCTGGCACCGGATCGTGGAGCGGGACGCGCACGACCACGTGGTGGTGAGCGCGCACTCGACCGGCGGGCTCA TCGTCGCCCTCTGGGCCGATGCCCGGCGGCCCGCTCTCGACGGCATGGTGCTGAACTCCCCCTGGCTGGACATGCAGGGC GGCCTGATGATCCGGACTCTCGGCACCCAGGTCGTCAAGCGGGTGGGATCGCGGCAGCCGAAGCGGATCGTCCCCCGCAA GGTCGAGGGCTTCTACGCCCGCAGCCTCCACATCGACCACGAGGGCGAGTGGGACTTCAACACCGAGTGGAAGCCGATCG ACCCCGGGCCGGTCTACTTCGGCTGGCTCCGGGCGATCCGGCTCGGCCACGACGCCCTGCACCGCGGCCTGGAGGTGGGC TGCCCGGTGCTGGTGCTGTCCTCCGGCGGGACGCACTGGCCCAAGGAGATGGGCCCGGACGTCCACAACTTCGACACCGT CCTCGAGGTGCCCCAGATCCGCCGCTGGGCCGTGGCCCTGGGCCGGCACGTGACCTACATCGCGATCGAGGGCGCCCGCC ACGACGTCGTCCTCTCGCTGCCGGAGCCCCGCGCCCAGGCGTACGCCGAGCTCGAGCGTTGGGCGGCGGCCTACCTGGGC TCCGGGGAGCCAGGCTCGACGCCCGGCGCCTGA
Upstream 100 bases:
>100_bases CGCGCTCGCTGGCCCACTGGATGCGGCCGGGCCGCGCCTGGCTGGTCACCACGAACCAACCACAGGTCGCGCTCGACCTG CGGGCTGGAAGACTGCGCGC
Downstream 100 bases:
>100_bases TCCGGCGACCGGAGCGGCTCGCCGTCGAACCTCTCCAGGGACGCGAGCTCCTCCACCGGGTGGCGGCGCAGCCGGGTGAC CTCGCGGACCGGCCGGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold Family Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTSGAFDELHPDVLGEAYLAETIGLPPDEEGPVVATLVVRRAERRTGRAVLHVHGFADYFFQTQYAEWWNERGYDFYAID LRKYGRSIRPHQTPNYVTDLRSYFADLDAAWHRIVERDAHDHVVVSAHSTGGLIVALWADARRPALDGMVLNSPWLDMQG GLMIRTLGTQVVKRVGSRQPKRIVPRKVEGFYARSLHIDHEGEWDFNTEWKPIDPGPVYFGWLRAIRLGHDALHRGLEVG CPVLVLSSGGTHWPKEMGPDVHNFDTVLEVPQIRRWAVALGRHVTYIAIEGARHDVVLSLPEPRAQAYAELERWAAAYLG SGEPGSTPGA
Sequences:
>Translated_330_residues MTSGAFDELHPDVLGEAYLAETIGLPPDEEGPVVATLVVRRAERRTGRAVLHVHGFADYFFQTQYAEWWNERGYDFYAID LRKYGRSIRPHQTPNYVTDLRSYFADLDAAWHRIVERDAHDHVVVSAHSTGGLIVALWADARRPALDGMVLNSPWLDMQG GLMIRTLGTQVVKRVGSRQPKRIVPRKVEGFYARSLHIDHEGEWDFNTEWKPIDPGPVYFGWLRAIRLGHDALHRGLEVG CPVLVLSSGGTHWPKEMGPDVHNFDTVLEVPQIRRWAVALGRHVTYIAIEGARHDVVLSLPEPRAQAYAELERWAAAYLG SGEPGSTPGA >Mature_329_residues TSGAFDELHPDVLGEAYLAETIGLPPDEEGPVVATLVVRRAERRTGRAVLHVHGFADYFFQTQYAEWWNERGYDFYAIDL RKYGRSIRPHQTPNYVTDLRSYFADLDAAWHRIVERDAHDHVVVSAHSTGGLIVALWADARRPALDGMVLNSPWLDMQGG LMIRTLGTQVVKRVGSRQPKRIVPRKVEGFYARSLHIDHEGEWDFNTEWKPIDPGPVYFGWLRAIRLGHDALHRGLEVGC PVLVLSSGGTHWPKEMGPDVHNFDTVLEVPQIRRWAVALGRHVTYIAIEGARHDVVLSLPEPRAQAYAELERWAAAYLGS GEPGSTPGA
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37093; Mature: 36962
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGAFDELHPDVLGEAYLAETIGLPPDEEGPVVATLVVRRAERRTGRAVLHVHGFADYF CCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECHHHHH FQTQYAEWWNERGYDFYAIDLRKYGRSIRPHQTPNYVTDLRSYFADLDAAWHRIVERDAH HHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DHVVVSAHSTGGLIVALWADARRPALDGMVLNSPWLDMQGGLMIRTLGTQVVKRVGSRQP CEEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCC KRIVPRKVEGFYARSLHIDHEGEWDFNTEWKPIDPGPVYFGWLRAIRLGHDALHRGLEVG CCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCHHCC CPVLVLSSGGTHWPKEMGPDVHNFDTVLEVPQIRRWAVALGRHVTYIAIEGARHDVVLSL CCEEEECCCCCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEC PEPRAQAYAELERWAAAYLGSGEPGSTPGA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSGAFDELHPDVLGEAYLAETIGLPPDEEGPVVATLVVRRAERRTGRAVLHVHGFADYF CCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECHHHHH FQTQYAEWWNERGYDFYAIDLRKYGRSIRPHQTPNYVTDLRSYFADLDAAWHRIVERDAH HHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DHVVVSAHSTGGLIVALWADARRPALDGMVLNSPWLDMQGGLMIRTLGTQVVKRVGSRQP CEEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCC KRIVPRKVEGFYARSLHIDHEGEWDFNTEWKPIDPGPVYFGWLRAIRLGHDALHRGLEVG CCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCHHCC CPVLVLSSGGTHWPKEMGPDVHNFDTVLEVPQIRRWAVALGRHVTYIAIEGARHDVVLSL CCEEEECCCCCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEC PEPRAQAYAELERWAAAYLGSGEPGSTPGA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA