| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715311
Identifier: 119715311
GI number: 119715311
Start: 1129765
End: 1130328
Strand: Direct
Name: 119715311
Synonym: Noca_1071
Alternate gene names: NA
Gene position: 1129765-1130328 (Clockwise)
Preceding gene: 119715305
Following gene: 119715315
Centisome position: 22.66
GC content: 72.7
Gene sequence:
>564_bases GTGACGCAGACGGACACCGGGCGCCCCGGTCGCTACCCACGGACCACCGGGGGGCTGGTGGGCTCGATCATCGTGCTGGT GCTCGCGGTGGTCGCCATCGTGCTGGTGCGCGGGATGTTCCGGGAGACGCCGAGCTACGAGCCCGAGCACGTCGACTACC TCGCGCTGGTCACCAGCGTGCAGCAGGTCGGGCTGACGCCGGCCTACCCGGCCGAGCTGCCGGCGGGCTGGTACGTCAAG GACGCCACGTTCGCCCCGGGTGACCGGCCGGTGCTCGATCTCGCGATGACCACGGCCGATGGCCGCTTCGCCGGCCTGCA CCAGGAGGACCGCGCCGTCGACGAGCTCGTCGGGAGGTACGTCGGCGGTGATGCGACCGAGGGCGACCCGGTGCGGATCG AGGGCGCCGTCGCCCCCGAGTGGCGGACCTTCTCCGACCCCGGCGGCGACCATGCCTTCGCGGCCGAGCTCGGGGAGGAG ACGATCCTCGTCTACGGCTCGGCGAGCGAGGACGAGCTGCGCGACCTGGTCGAGTCGCTCACCACGGACAAGCTGGCGCC GTAG
Upstream 100 bases:
>100_bases GAAACTTCGGGCCAGAAGTTCCAACTTCCCCGGTGAACCGGGGAAACCGCCCGCCAGGTCACCGCGCCGGGTGCGGCGGG GCGGCTGAGAGGATGGGCCG
Downstream 100 bases:
>100_bases CAGCGAAGTCCCCCGCCCCGCGTGGATCGCGGGACGGGGGACTCGAGCGACCCCCCGGTCAGTCCAGAGTCACCGATGTG TTGGTCGTAGCGGTCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTQTDTGRPGRYPRTTGGLVGSIIVLVLAVVAIVLVRGMFRETPSYEPEHVDYLALVTSVQQVGLTPAYPAELPAGWYVK DATFAPGDRPVLDLAMTTADGRFAGLHQEDRAVDELVGRYVGGDATEGDPVRIEGAVAPEWRTFSDPGGDHAFAAELGEE TILVYGSASEDELRDLVESLTTDKLAP
Sequences:
>Translated_187_residues MTQTDTGRPGRYPRTTGGLVGSIIVLVLAVVAIVLVRGMFRETPSYEPEHVDYLALVTSVQQVGLTPAYPAELPAGWYVK DATFAPGDRPVLDLAMTTADGRFAGLHQEDRAVDELVGRYVGGDATEGDPVRIEGAVAPEWRTFSDPGGDHAFAAELGEE TILVYGSASEDELRDLVESLTTDKLAP >Mature_186_residues TQTDTGRPGRYPRTTGGLVGSIIVLVLAVVAIVLVRGMFRETPSYEPEHVDYLALVTSVQQVGLTPAYPAELPAGWYVKD ATFAPGDRPVLDLAMTTADGRFAGLHQEDRAVDELVGRYVGGDATEGDPVRIEGAVAPEWRTFSDPGGDHAFAAELGEET ILVYGSASEDELRDLVESLTTDKLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20018; Mature: 19886
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTDTGRPGRYPRTTGGLVGSIIVLVLAVVAIVLVRGMFRETPSYEPEHVDYLALVTSV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QQVGLTPAYPAELPAGWYVKDATFAPGDRPVLDLAMTTADGRFAGLHQEDRAVDELVGRY HHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHH VGGDATEGDPVRIEGAVAPEWRTFSDPGGDHAFAAELGEETILVYGSASEDELRDLVESL CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHH TTDKLAP HHCCCCC >Mature Secondary Structure TQTDTGRPGRYPRTTGGLVGSIIVLVLAVVAIVLVRGMFRETPSYEPEHVDYLALVTSV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QQVGLTPAYPAELPAGWYVKDATFAPGDRPVLDLAMTTADGRFAGLHQEDRAVDELVGRY HHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHH VGGDATEGDPVRIEGAVAPEWRTFSDPGGDHAFAAELGEETILVYGSASEDELRDLVESL CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHH TTDKLAP HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA