| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715305
Identifier: 119715305
GI number: 119715305
Start: 1124718
End: 1125563
Strand: Direct
Name: 119715305
Synonym: Noca_1065
Alternate gene names: NA
Gene position: 1124718-1125563 (Clockwise)
Preceding gene: 119715303
Following gene: 119715311
Centisome position: 22.56
GC content: 74.0
Gene sequence:
>846_bases GTGGCCCATGTGACCTCCAACACACTGGCCGACTTCCTGCTGCCGACGGGCTTCGAGTGCCCGCGGCCGTCGGCGGTCCT GCGCGAGGGCAGCGCGGTGCTCGAGGCCGGCCGCTACGCCTGGCGTGCCACGGCGGAGCGACGCGCCCGCCGGTCCACGC CGTACGCCGCCCGCCAGGTGTCCCGCCACGGTGACCCGGTGATCCTGGTCCCGGGGTTCCTGGCCGGGGACGGCACGCTC GCGCTGATGGCCAAGGCGCTGCGGGCGCAGGGGTTTCGCACGTACCGCTCCCAGATCCACGCCAACGTCGGCTGCACGCT CAACGCGGCCGCGCAGCTCGAGACCCGGCTGGAGTCGATCGCGATGCGGCGCGGCTCCCGGGTGCAGATCGTCGGGCACA GCCTGGGCGGGATGCTGGCCCGCGGGATCGCCGTACGCCGCCCCGACCTGGTGTCGAACATCGTCACGATGGGCAGCCCG ATGCTGGCGCCCGGCGCTCACCACCGCTCCCTCGCGACCAGCGTCGACCTGCTGGTCCGGCTCAGCCGGGCCGGCGTCCC CGGCCTGATGTCCGAGGAGTGCGTGGCCGGCTCGTGCGCCCGGCAGAGCTTCGGCGAGAGCCGGCAGCCGCTCGCGCCGG ACGTCGGCTTCACGGCCGTCTACTCCCGCCGCGACGGGATCGTCGACTGGCGGGCCTGCGTGGACCCGACGGCGCGCGCC GTCGAGGTGACCGCCTCCCACCTCGGCATGGCCTTCGACCCGCGGGTCATCGACGTGGTGCTCGGCTCGCTGCTGCGCAG CAGCGAGGTGTCAGCTCTCGAAGTTGACCGCGGAAAAAGCGCGTAG
Upstream 100 bases:
>100_bases CAGGTACGACGCCGGGTGCGGACCGGTGCCGGCGGAAGGGACGACACGTGGCCGGATCGGCTCGGCAATTGCCCGCGAAT CGACGGGTGGAGGCCGTACC
Downstream 100 bases:
>100_bases CTTCTGCGGCTGGTGCTCGGAGATGATCCGGCGGATCGTGCCGCTGCGCGCGCGCATCACGATCGAGTGCGTGGTCACGC TGTCGGACCGGTAGCGAACG
Product: PGAP1 family protein
Products: NA
Alternate protein names: Pgap1 Family Protein; PGAP1-Like Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MAHVTSNTLADFLLPTGFECPRPSAVLREGSAVLEAGRYAWRATAERRARRSTPYAARQVSRHGDPVILVPGFLAGDGTL ALMAKALRAQGFRTYRSQIHANVGCTLNAAAQLETRLESIAMRRGSRVQIVGHSLGGMLARGIAVRRPDLVSNIVTMGSP MLAPGAHHRSLATSVDLLVRLSRAGVPGLMSEECVAGSCARQSFGESRQPLAPDVGFTAVYSRRDGIVDWRACVDPTARA VEVTASHLGMAFDPRVIDVVLGSLLRSSEVSALEVDRGKSA
Sequences:
>Translated_281_residues MAHVTSNTLADFLLPTGFECPRPSAVLREGSAVLEAGRYAWRATAERRARRSTPYAARQVSRHGDPVILVPGFLAGDGTL ALMAKALRAQGFRTYRSQIHANVGCTLNAAAQLETRLESIAMRRGSRVQIVGHSLGGMLARGIAVRRPDLVSNIVTMGSP MLAPGAHHRSLATSVDLLVRLSRAGVPGLMSEECVAGSCARQSFGESRQPLAPDVGFTAVYSRRDGIVDWRACVDPTARA VEVTASHLGMAFDPRVIDVVLGSLLRSSEVSALEVDRGKSA >Mature_280_residues AHVTSNTLADFLLPTGFECPRPSAVLREGSAVLEAGRYAWRATAERRARRSTPYAARQVSRHGDPVILVPGFLAGDGTLA LMAKALRAQGFRTYRSQIHANVGCTLNAAAQLETRLESIAMRRGSRVQIVGHSLGGMLARGIAVRRPDLVSNIVTMGSPM LAPGAHHRSLATSVDLLVRLSRAGVPGLMSEECVAGSCARQSFGESRQPLAPDVGFTAVYSRRDGIVDWRACVDPTARAV EVTASHLGMAFDPRVIDVVLGSLLRSSEVSALEVDRGKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29967; Mature: 29836
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVTSNTLADFLLPTGFECPRPSAVLREGSAVLEAGRYAWRATAERRARRSTPYAARQV CCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SRHGDPVILVPGFLAGDGTLALMAKALRAQGFRTYRSQIHANVGCTLNAAAQLETRLESI HHCCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHH AMRRGSRVQIVGHSLGGMLARGIAVRRPDLVSNIVTMGSPMLAPGAHHRSLATSVDLLVR HHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LSRAGVPGLMSEECVAGSCARQSFGESRQPLAPDVGFTAVYSRRDGIVDWRACVDPTARA HHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCCEEHHHHCCCCHHH VEVTASHLGMAFDPRVIDVVLGSLLRSSEVSALEVDRGKSA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure AHVTSNTLADFLLPTGFECPRPSAVLREGSAVLEAGRYAWRATAERRARRSTPYAARQV CCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SRHGDPVILVPGFLAGDGTLALMAKALRAQGFRTYRSQIHANVGCTLNAAAQLETRLESI HHCCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHH AMRRGSRVQIVGHSLGGMLARGIAVRRPDLVSNIVTMGSPMLAPGAHHRSLATSVDLLVR HHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LSRAGVPGLMSEECVAGSCARQSFGESRQPLAPDVGFTAVYSRRDGIVDWRACVDPTARA HHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCCEEHHHHCCCCHHH VEVTASHLGMAFDPRVIDVVLGSLLRSSEVSALEVDRGKSA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA