| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is asnO [H]
Identifier: 119715283
GI number: 119715283
Start: 1099509
End: 1100573
Strand: Direct
Name: asnO [H]
Synonym: Noca_1042
Alternate gene names: 119715283
Gene position: 1099509-1100573 (Clockwise)
Preceding gene: 119715282
Following gene: 119715284
Centisome position: 22.05
GC content: 66.57
Gene sequence:
>1065_bases GTGAGCCTCACAACGTCTGCCCGTAACCAGTGGGAGACCTTGGTCCTCACCACTTCCGAGCATGACGTCCTCGCCGACGC GGGGGGCGCCTCGGCCCCGGACCCGTACACGGAGCCCGCGGCGTTCAGGCGCTACGCCACCGATGTCTGGGCACAGCTGA ACGACAGTACCCGCGAGAGGGTACAAGCGCTGCGCCTCGGAATCTCGCCGCGGCCCGAGTTGTACATCGCGAACCTTCCT GCGGTCCCCAGTCTGCCGCCCACGCCGACGGACGGGCGGTGGGTGAAGACGACCTCAGGGCACCACAGCGAACTGCTGAT GGTCGCGTTCGCCTCGGAGCTTGGATGCCCGATCTCGTACGCCGACCAGCGGTCGGGCGCGGTGTTCCACGACATCTATC CGACGCGCGCTAACGCAGCGGCCGTGTCGAGCCAGAGCCACCTCGTGGGTCTCGGCTTTCACTCGGAGATGTTCTTCCAC CCGACCCCGCCGGATTTCCTTGTCCTCCACTGCCTTCGTCCCGATCCGGGGGGCGCCGCTCTCACGGGAGTCTCGGATAT GGCAAGCGTCGAGTTGTCGCTGAGCCGCGCTGACATGAACGTTCTAAGCGCTCCGAGTTTCGCGCTGGATCTTGCACGGT TGCACGGCAGCTATACGTACCTCGGGCGGCCCATTGCCGAGGCGGATCCGCGGCCGTGCGTGCCTGTCGTGGGGCGCGAC AGGATTCGCTTCGAGCCTGCCTTGACTACGCCGACCTCGGGAACTGCCCAGAGGGCGTTGGTGAGCGCCGAGCGCGTTGC GGAGCGCGAGGTTGCCTTTGGCGCTCTCGGTGATGGCGCCATGTTGCTTGTGGACAACCGTCGTGCGGTCCACTCGCGCA CGTCTTTCCCTGCCCGGTACGACGGCACTGACCGCTGGCTCCGTCGGATGATGGTGGCGGCGGTCGATACGCCGCCTGCA GATGGCATCGTGCGGTTCTCCGACCTGGATCTCATGAGACCGTGGGAAGCGTGCGGAGCTGCATTCGCGGAGGTCCCGTA CGGACGCGCTGAGGTGCTGGCATGA
Upstream 100 bases:
>100_bases TCGTGACCGCTGCCCTCACTGTTGCAGGCCGTTGAGAACCCAGAGCCAGACACGGGAACGGTTAAGCAGGAGACAGCGTC CAACCCGACAGGAGACTTCC
Downstream 100 bases:
>100_bases TCACCTCGGACACCCAAGAGATTCCTGTTCTGGCGTGGAACGGCAATGCTCGCGGGGCGGTCGTCGACGCCGCCCGCGGG ATACTGGCCACCGTAGGCCT
Product: oxygenase (secreted protein)
Products: NA
Alternate protein names: L-asparagine 3-hydroxylase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSLTTSARNQWETLVLTTSEHDVLADAGGASAPDPYTEPAAFRRYATDVWAQLNDSTRERVQALRLGISPRPELYIANLP AVPSLPPTPTDGRWVKTTSGHHSELLMVAFASELGCPISYADQRSGAVFHDIYPTRANAAAVSSQSHLVGLGFHSEMFFH PTPPDFLVLHCLRPDPGGAALTGVSDMASVELSLSRADMNVLSAPSFALDLARLHGSYTYLGRPIAEADPRPCVPVVGRD RIRFEPALTTPTSGTAQRALVSAERVAEREVAFGALGDGAMLLVDNRRAVHSRTSFPARYDGTDRWLRRMMVAAVDTPPA DGIVRFSDLDLMRPWEACGAAFAEVPYGRAEVLA
Sequences:
>Translated_354_residues MSLTTSARNQWETLVLTTSEHDVLADAGGASAPDPYTEPAAFRRYATDVWAQLNDSTRERVQALRLGISPRPELYIANLP AVPSLPPTPTDGRWVKTTSGHHSELLMVAFASELGCPISYADQRSGAVFHDIYPTRANAAAVSSQSHLVGLGFHSEMFFH PTPPDFLVLHCLRPDPGGAALTGVSDMASVELSLSRADMNVLSAPSFALDLARLHGSYTYLGRPIAEADPRPCVPVVGRD RIRFEPALTTPTSGTAQRALVSAERVAEREVAFGALGDGAMLLVDNRRAVHSRTSFPARYDGTDRWLRRMMVAAVDTPPA DGIVRFSDLDLMRPWEACGAAFAEVPYGRAEVLA >Mature_353_residues SLTTSARNQWETLVLTTSEHDVLADAGGASAPDPYTEPAAFRRYATDVWAQLNDSTRERVQALRLGISPRPELYIANLPA VPSLPPTPTDGRWVKTTSGHHSELLMVAFASELGCPISYADQRSGAVFHDIYPTRANAAAVSSQSHLVGLGFHSEMFFHP TPPDFLVLHCLRPDPGGAALTGVSDMASVELSLSRADMNVLSAPSFALDLARLHGSYTYLGRPIAEADPRPCVPVVGRDR IRFEPALTTPTSGTAQRALVSAERVAEREVAFGALGDGAMLLVDNRRAVHSRTSFPARYDGTDRWLRRMMVAAVDTPPAD GIVRFSDLDLMRPWEACGAAFAEVPYGRAEVLA
Specific function: Catalyzes the 3-hydroxylation of L-asparagine to (2S,3S)-3-hydroxyasparagine. The 3-hydroxylated asparagine produced is incorporated at position 9 during the biosynthesis of the non-ribosomally synthesized calcium-dependent antibiotic (CDA), a 11-residue
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the clavaminate synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014503 - InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: NA
Molecular weight: Translated: 38295; Mature: 38163
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTTSARNQWETLVLTTSEHDVLADAGGASAPDPYTEPAAFRRYATDVWAQLNDSTRER CCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH VQALRLGISPRPELYIANLPAVPSLPPTPTDGRWVKTTSGHHSELLMVAFASELGCPISY HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHEEEEEEHHHHCCCCCC ADQRSGAVFHDIYPTRANAAAVSSQSHLVGLGFHSEMFFHPTPPDFLVLHCLRPDPGGAA CCCCCCCEEEECCCCCCCHHHCCCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCCE LTGVSDMASVELSLSRADMNVLSAPSFALDLARLHGSYTYLGRPIAEADPRPCVPVVGRD EECCCHHHEEEEEEECCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RIRFEPALTTPTSGTAQRALVSAERVAEREVAFGALGDGAMLLVDNRRAVHSRTSFPARY CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHCCCCCCCCC DGTDRWLRRMMVAAVDTPPADGIVRFSDLDLMRPWEACGAAFAEVPYGRAEVLA CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure SLTTSARNQWETLVLTTSEHDVLADAGGASAPDPYTEPAAFRRYATDVWAQLNDSTRER CCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH VQALRLGISPRPELYIANLPAVPSLPPTPTDGRWVKTTSGHHSELLMVAFASELGCPISY HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHEEEEEEHHHHCCCCCC ADQRSGAVFHDIYPTRANAAAVSSQSHLVGLGFHSEMFFHPTPPDFLVLHCLRPDPGGAA CCCCCCCEEEECCCCCCCHHHCCCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCCE LTGVSDMASVELSLSRADMNVLSAPSFALDLARLHGSYTYLGRPIAEADPRPCVPVVGRD EECCCHHHEEEEEEECCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RIRFEPALTTPTSGTAQRALVSAERVAEREVAFGALGDGAMLLVDNRRAVHSRTSFPARY CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHCCCCCCCCC DGTDRWLRRMMVAAVDTPPADGIVRFSDLDLMRPWEACGAAFAEVPYGRAEVLA CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]