| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715282
Identifier: 119715282
GI number: 119715282
Start: 1098217
End: 1099443
Strand: Direct
Name: 119715282
Synonym: Noca_1041
Alternate gene names: NA
Gene position: 1098217-1099443 (Clockwise)
Preceding gene: 119715276
Following gene: 119715283
Centisome position: 22.03
GC content: 67.56
Gene sequence:
>1227_bases ATGGAGCACAACAACACCCGCGGGAACGGGCCGGAGAGGCCCCAGAGGATTGCGGACATCATCAAGACGGCCATCGAGGC GGCCGTCAGCATGCCGGAGGTCACAGCCGAGGCGTCAATGTTGTCCAAGTCCATGAAGCCGTTCGTAGGCAGCCTCTGCC TAGGCGCCACCCGCGGACTCGGAGACTGCCCGGCCGATGGCACCGCCAGGGCCAGGCACCTCTACGTCGAGTCGCTCGGC CTTGCCCCGGCTCATGTCCGCGAGGCGCTGACCGTCGCCAAGAGCGATGGCGTCGACCCCGTCGCTCAGTCCGCCCTATA CGAGGTCGCTCGACGGGCGATCGAGGGCCTCCTCCCGTTCGCGCTCGAGGCGTACAGCGAGGGCAAGGCGATCGAAGCCG CCACGTTGGCAGTGCTGCCCGCTGAACGGCGTGGTAGCTCGCACTCGACTGTCCGCGACACCAGCGCGACCCACGCCCGT GGGCGTCTCACTGCGCATGCCGCCGGGCTGAATGCTTGGCCGGTCCTGGCGTACTCGGAGACCACCCGACTACTGGGCGA CGAGTCCGGGCTCCCGCTCACGGATTCGCAGGTCAACCCCGAGAAGAGGGCGAGGCCTCCAGCCACGTTCTTCGAGAAGA TCGATCCGGCTGAGCTGGCCGTCCGTGGCCTGCGAGTCGCCCTGCCGCTGTGCCACAGGCGCGAGGATGCGGAGGACCTC GTCCAGGACGCTCTGGAGCGCATGTGCAAATACGGCGTCCAGCGCGATGACTTCACGTTCTCGTACTTCGCGACGACGAT CCGCAATCTCGCCACCAACCGCGCGCTCGACGCGGCGAAGGGTCCGTTGACGCCTGGCGATGAGATCATCGAGATCTTCC AGCCGGCGCACGACGACCAGGAGCGCGTCGAACTCCTCGCCTGGAACGTCAAGCGCGAGATTCTCAACGAGGCCGGCTGC GGGCGCCGCTGCCGCGCCGCCAGCGTCTCCGTGTCAGGTACCCACTACGTCTCGCACCAGTCGGCGGACGTCGCGGTCGC GGCAATCCGGGAGCTCATCGCACGCGACGAGCTCGACGACCGTCCCACTAGCGGCAAGAGCCGCCGAACTGTGGCGGAGG TGATCGCCTCCGGCGCTGGCGCCTACAGCGTGGAGTTTTCCGACGAGATCGCTAAGCGAGCCACCCACCTACTCGTGACC GCTGCCCTCACTGTTGCAGGCCGTTGA
Upstream 100 bases:
>100_bases CTGCTTACCTCGCTGACCTACTCCTGCTGACCCCGGCCGCCTTCAGAGCCTCGAAGTACCGAGCGAAACACCTCGCTCGC GGTGATTTCGAGGAGCTGGA
Downstream 100 bases:
>100_bases GAACCCAGAGCCAGACACGGGAACGGTTAAGCAGGAGACAGCGTCCAACCCGACAGGAGACTTCCGTGAGCCTCACAACG TCTGCCCGTAACCAGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MEHNNTRGNGPERPQRIADIIKTAIEAAVSMPEVTAEASMLSKSMKPFVGSLCLGATRGLGDCPADGTARARHLYVESLG LAPAHVREALTVAKSDGVDPVAQSALYEVARRAIEGLLPFALEAYSEGKAIEAATLAVLPAERRGSSHSTVRDTSATHAR GRLTAHAAGLNAWPVLAYSETTRLLGDESGLPLTDSQVNPEKRARPPATFFEKIDPAELAVRGLRVALPLCHRREDAEDL VQDALERMCKYGVQRDDFTFSYFATTIRNLATNRALDAAKGPLTPGDEIIEIFQPAHDDQERVELLAWNVKREILNEAGC GRRCRAASVSVSGTHYVSHQSADVAVAAIRELIARDELDDRPTSGKSRRTVAEVIASGAGAYSVEFSDEIAKRATHLLVT AALTVAGR
Sequences:
>Translated_408_residues MEHNNTRGNGPERPQRIADIIKTAIEAAVSMPEVTAEASMLSKSMKPFVGSLCLGATRGLGDCPADGTARARHLYVESLG LAPAHVREALTVAKSDGVDPVAQSALYEVARRAIEGLLPFALEAYSEGKAIEAATLAVLPAERRGSSHSTVRDTSATHAR GRLTAHAAGLNAWPVLAYSETTRLLGDESGLPLTDSQVNPEKRARPPATFFEKIDPAELAVRGLRVALPLCHRREDAEDL VQDALERMCKYGVQRDDFTFSYFATTIRNLATNRALDAAKGPLTPGDEIIEIFQPAHDDQERVELLAWNVKREILNEAGC GRRCRAASVSVSGTHYVSHQSADVAVAAIRELIARDELDDRPTSGKSRRTVAEVIASGAGAYSVEFSDEIAKRATHLLVT AALTVAGR >Mature_408_residues MEHNNTRGNGPERPQRIADIIKTAIEAAVSMPEVTAEASMLSKSMKPFVGSLCLGATRGLGDCPADGTARARHLYVESLG LAPAHVREALTVAKSDGVDPVAQSALYEVARRAIEGLLPFALEAYSEGKAIEAATLAVLPAERRGSSHSTVRDTSATHAR GRLTAHAAGLNAWPVLAYSETTRLLGDESGLPLTDSQVNPEKRARPPATFFEKIDPAELAVRGLRVALPLCHRREDAEDL VQDALERMCKYGVQRDDFTFSYFATTIRNLATNRALDAAKGPLTPGDEIIEIFQPAHDDQERVELLAWNVKREILNEAGC GRRCRAASVSVSGTHYVSHQSADVAVAAIRELIARDELDDRPTSGKSRRTVAEVIASGAGAYSVEFSDEIAKRATHLLVT AALTVAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43878; Mature: 43878
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHNNTRGNGPERPQRIADIIKTAIEAAVSMPEVTAEASMLSKSMKPFVGSLCLGATRGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GDCPADGTARARHLYVESLGLAPAHVREALTVAKSDGVDPVAQSALYEVARRAIEGLLPF CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ALEAYSEGKAIEAATLAVLPAERRGSSHSTVRDTSATHARGRLTAHAAGLNAWPVLAYSE HHHHHCCCCCEEHHHHEEECHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCCEEEEECH TTRLLGDESGLPLTDSQVNPEKRARPPATFFEKIDPAELAVRGLRVALPLCHRREDAEDL HHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH VQDALERMCKYGVQRDDFTFSYFATTIRNLATNRALDAAKGPLTPGDEIIEIFQPAHDDQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHH ERVELLAWNVKREILNEAGCGRRCRAASVSVSGTHYVSHQSADVAVAAIRELIARDELDD HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCC RPTSGKSRRTVAEVIASGAGAYSVEFSDEIAKRATHLLVTAALTVAGR CCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEHNNTRGNGPERPQRIADIIKTAIEAAVSMPEVTAEASMLSKSMKPFVGSLCLGATRGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GDCPADGTARARHLYVESLGLAPAHVREALTVAKSDGVDPVAQSALYEVARRAIEGLLPF CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ALEAYSEGKAIEAATLAVLPAERRGSSHSTVRDTSATHARGRLTAHAAGLNAWPVLAYSE HHHHHCCCCCEEHHHHEEECHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCCEEEEECH TTRLLGDESGLPLTDSQVNPEKRARPPATFFEKIDPAELAVRGLRVALPLCHRREDAEDL HHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH VQDALERMCKYGVQRDDFTFSYFATTIRNLATNRALDAAKGPLTPGDEIIEIFQPAHDDQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHH ERVELLAWNVKREILNEAGCGRRCRAASVSVSGTHYVSHQSADVAVAAIRELIARDELDD HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCC RPTSGKSRRTVAEVIASGAGAYSVEFSDEIAKRATHLLVTAALTVAGR CCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA