| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715280
Identifier: 119715280
GI number: 119715280
Start: 1095685
End: 1097034
Strand: Reverse
Name: 119715280
Synonym: Noca_1039
Alternate gene names: NA
Gene position: 1097034-1095685 (Counterclockwise)
Preceding gene: 119715281
Following gene: 119715279
Centisome position: 22.0
GC content: 62.22
Gene sequence:
>1350_bases ATGACGGAACGGGCGGCGGTCCTCAAGAAGGTGACCGAGGAGCTCGGGGACCGCACACTCGTGTGGTCAGGGATCCGTGG GGACGACATCGAGCCACTACGCGACGTACCGCAACTTGGGTACTCGTTCTCGATCGCCGGGGCGTACAACGGTCGCTCTG ACGTTCGTGGTCTGGCCTACGAACAGCTCACTCGAGTACGTGTCGATCCGGAGGTTTGGGACATCGACTTCCACCACCAT GAAAGAGCTACGGAGGAGTTCCGGCGGGGACTTCTCCGATCCATGAGCGAGCCAAGCGCACTCCTTCCGTACCGTCCGTC AAGCTTCCTCTCGGCGATCCACTTCGCTCGCCAGGAACGCTGCGTGAACCTCGGCCTGTTTGGCGCGCACCAATCCGCCT TCGAGCACAAGCCCTTCGTCGAGTCAGAAGTCGCCCAACTGGGAATCCCGCACATCCCGTGGACCTATATCGCCGACGAG GAACAGCCCCTCGCGCGCAACCTCGTTTCCGCCGGTCCTCTTGTCCTGCGCCGCAGTCGCACGTCGGGTGGTGAAGGCAT CGTGCGCGTCGACTCAGCCGCTGAGATTGGACCACACTGGCCGAAGGGCACCGAGGAGTTCGTGAGCGTGGCGCCCTTCA TAGCCGACACAATTCCCGTGAATGTCGGTGCCACTGTTTGGCGGGACTCTCGAGGCGACGATTGCGTGACGGTGCACCAC CCGTCGGTCCAGCTCATCGGCATCAAGTCATGTGTGACCCGCGAGTTCGGCTATTGCGGCAATGACTTCGGTGCGGCGCG CGACCTCGACCGGTCCACTATCGATCGGATCGAGCAGTCCACCAAGCGCGTCGGGCGCTGGTTGCGCGGGAACGGTTACA TCGGCACGTTTGGCGTCGACTACCTGATCAAGGATGGAGTGCCCCTGTTCACCGAGATCAACGCGAGATTTCAAGGCTCT ACATACTCGTCGTGTCGACTCTCGATCGAGCAGGGGGAAGCCTGTCTGATGCTTGAGCACGTCGCCGCCTGGTTGGGCCT ACCCATGCCGGAATCACCGAGCTTGTACGAGCGCACACGAGCAGTGCGGGATCTCGCGAACCTAGCGGTGCACTGGACCG GCCGAGAGGCCGCAACGGTCAACGCAACCGCTCTCTTCAGTGTGGTGATGGATGACTTCGATCCCAAAGCGACCAGCGAC AGCGTTGTGGCAACGGACGTCGCCAACGAGCCAGGCTCCCTGGTCGGCCGTTTCAACGTTGGAAGGCGGGTGACCGATAC CGGCTACGATCTTGCCCCTGAACTAGACCGACTGATTGACCGCTGGCGGCGCTCGGAGGAGGCATCTTGA
Upstream 100 bases:
>100_bases GGGGGAATAATCTCGGGCGAGTGCGTGTGATGCTCCTGGACCGAAGGAGCATTTCGCCGTCGTTCGCCGGACAGGAATTC GTTCGGGCCGAGGCATCCGC
Downstream 100 bases:
>100_bases CGAACGAGTCGAGGACACGCCTCTACGAAAAGGCGGATGGATCGTCCAAGTTCTACGCGACCGCGAACAACAACTGGACC GCACTGCTGAAGGACAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTERAAVLKKVTEELGDRTLVWSGIRGDDIEPLRDVPQLGYSFSIAGAYNGRSDVRGLAYEQLTRVRVDPEVWDIDFHHH ERATEEFRRGLLRSMSEPSALLPYRPSSFLSAIHFARQERCVNLGLFGAHQSAFEHKPFVESEVAQLGIPHIPWTYIADE EQPLARNLVSAGPLVLRRSRTSGGEGIVRVDSAAEIGPHWPKGTEEFVSVAPFIADTIPVNVGATVWRDSRGDDCVTVHH PSVQLIGIKSCVTREFGYCGNDFGAARDLDRSTIDRIEQSTKRVGRWLRGNGYIGTFGVDYLIKDGVPLFTEINARFQGS TYSSCRLSIEQGEACLMLEHVAAWLGLPMPESPSLYERTRAVRDLANLAVHWTGREAATVNATALFSVVMDDFDPKATSD SVVATDVANEPGSLVGRFNVGRRVTDTGYDLAPELDRLIDRWRRSEEAS
Sequences:
>Translated_449_residues MTERAAVLKKVTEELGDRTLVWSGIRGDDIEPLRDVPQLGYSFSIAGAYNGRSDVRGLAYEQLTRVRVDPEVWDIDFHHH ERATEEFRRGLLRSMSEPSALLPYRPSSFLSAIHFARQERCVNLGLFGAHQSAFEHKPFVESEVAQLGIPHIPWTYIADE EQPLARNLVSAGPLVLRRSRTSGGEGIVRVDSAAEIGPHWPKGTEEFVSVAPFIADTIPVNVGATVWRDSRGDDCVTVHH PSVQLIGIKSCVTREFGYCGNDFGAARDLDRSTIDRIEQSTKRVGRWLRGNGYIGTFGVDYLIKDGVPLFTEINARFQGS TYSSCRLSIEQGEACLMLEHVAAWLGLPMPESPSLYERTRAVRDLANLAVHWTGREAATVNATALFSVVMDDFDPKATSD SVVATDVANEPGSLVGRFNVGRRVTDTGYDLAPELDRLIDRWRRSEEAS >Mature_448_residues TERAAVLKKVTEELGDRTLVWSGIRGDDIEPLRDVPQLGYSFSIAGAYNGRSDVRGLAYEQLTRVRVDPEVWDIDFHHHE RATEEFRRGLLRSMSEPSALLPYRPSSFLSAIHFARQERCVNLGLFGAHQSAFEHKPFVESEVAQLGIPHIPWTYIADEE QPLARNLVSAGPLVLRRSRTSGGEGIVRVDSAAEIGPHWPKGTEEFVSVAPFIADTIPVNVGATVWRDSRGDDCVTVHHP SVQLIGIKSCVTREFGYCGNDFGAARDLDRSTIDRIEQSTKRVGRWLRGNGYIGTFGVDYLIKDGVPLFTEINARFQGST YSSCRLSIEQGEACLMLEHVAAWLGLPMPESPSLYERTRAVRDLANLAVHWTGREAATVNATALFSVVMDDFDPKATSDS VVATDVANEPGSLVGRFNVGRRVTDTGYDLAPELDRLIDRWRRSEEAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49857; Mature: 49726
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERAAVLKKVTEELGDRTLVWSGIRGDDIEPLRDVPQLGYSFSIAGAYNGRSDVRGLAY CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHH EQLTRVRVDPEVWDIDFHHHERATEEFRRGLLRSMSEPSALLPYRPSSFLSAIHFARQER HHHHHEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH CVNLGLFGAHQSAFEHKPFVESEVAQLGIPHIPWTYIADEEQPLARNLVSAGPLVLRRSR HHEEEEECCCHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEECC TSGGEGIVRVDSAAEIGPHWPKGTEEFVSVAPFIADTIPVNVGATVWRDSRGDDCVTVHH CCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEC PSVQLIGIKSCVTREFGYCGNDFGAARDLDRSTIDRIEQSTKRVGRWLRGNGYIGTFGVD CCEEEEEHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH YLIKDGVPLFTEINARFQGSTYSSCRLSIEQGEACLMLEHVAAWLGLPMPESPSLYERTR HHHHCCCCEEEECCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AVRDLANLAVHWTGREAATVNATALFSVVMDDFDPKATSDSVVATDVANEPGSLVGRFNV HHHHHHHHEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECC GRRVTDTGYDLAPELDRLIDRWRRSEEAS CCEECCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TERAAVLKKVTEELGDRTLVWSGIRGDDIEPLRDVPQLGYSFSIAGAYNGRSDVRGLAY CHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHH EQLTRVRVDPEVWDIDFHHHERATEEFRRGLLRSMSEPSALLPYRPSSFLSAIHFARQER HHHHHEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH CVNLGLFGAHQSAFEHKPFVESEVAQLGIPHIPWTYIADEEQPLARNLVSAGPLVLRRSR HHEEEEECCCHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEECC TSGGEGIVRVDSAAEIGPHWPKGTEEFVSVAPFIADTIPVNVGATVWRDSRGDDCVTVHH CCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEC PSVQLIGIKSCVTREFGYCGNDFGAARDLDRSTIDRIEQSTKRVGRWLRGNGYIGTFGVD CCEEEEEHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH YLIKDGVPLFTEINARFQGSTYSSCRLSIEQGEACLMLEHVAAWLGLPMPESPSLYERTR HHHHCCCCEEEECCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AVRDLANLAVHWTGREAATVNATALFSVVMDDFDPKATSDSVVATDVANEPGSLVGRFNV HHHHHHHHEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECC GRRVTDTGYDLAPELDRLIDRWRRSEEAS CCEECCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA