| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715279
Identifier: 119715279
GI number: 119715279
Start: 1093670
End: 1095688
Strand: Reverse
Name: 119715279
Synonym: Noca_1038
Alternate gene names: NA
Gene position: 1095688-1093670 (Counterclockwise)
Preceding gene: 119715280
Following gene: 119715278
Centisome position: 21.98
GC content: 61.86
Gene sequence:
>2019_bases TTGACGAACGAGTCGAGGACACGCCTCTACGAAAAGGCGGATGGATCGTCCAAGTTCTACGCGACCGCGAACAACAACTG GACCGCACTGCTGAAGGACAGGACCAACCTGACCAGAGATGGCGAAGCACATCTCTGCACGTTGCTCGGTCGTCTCGCTG AACCCATGCGCAAGCAGCTGAGAGTCAAGCCGCTTCCCGAGCCAACCGGCCTTCCCTGGCTCACTCCCGTGTTGGGGAGC GGGTGTCTTGGCGGCCTGTCCCCTGAGCAGAGCCAGCGCCTGAAGCGCCGACCACGCGAGGTGATTCAAGCACTCGAAGA CTCAGTCCTGGCCGATGGCTCGTCCTCGAGGAATCTTGTGGCAAGCCTGGTCACCTCGCTCATCACAAGCAGAATTCCCG ACGTGGTTCTCGACGACTTCGCCCCATGGGATAGCGCCGGCCACGGAGCGTCGTCCCCAGTGGCTGAAACCATCCAGGCC GTGGCGCTGCTGCAACGCGCGCAACGTGAGGCGCTCGCGCTGTCCGGCCTCGCCGTGGGCCCAACAACGACCTTCCAGGT GACCAATCCAGACGCGGCAGCCGAGATTCAAGTCAACCTGATGGAGCCCGCTCTCGTCCATCTCGGAGTTGCGCTAGGCG GTGCCGACACGTCAGGGAGCACCGTCTTGGCCGCAAGTCGGACGCTGCTGGAACACTTCAAGACGACACTCGAAGCTACC TCGACGGACGACCGGATGCGCCTCTCAGGTAGAGACCTTGACGTGCTCGTCGAGATCGCATGGCTCCTCTTGATCGAGCC CGTTGGGGTGTATCCGGGATGGCGTGACCTTGTGGCGTCGGCGGCCGTACAGATGAGCGACGGCGACGACATCACCAGTG CGCTCGACGCGTTGGACGTACGTCAGCCACGGTTGAGGGTTAACTCACTCGAGTCCCTTAGCACCATCGGGAGCAGACTC GCTGGTCTCGGCGAAGCAACACTTAGTTCGTTCGAAGAGAAAGGCGGTGACCGCCACGCATTCTTCGATGCGATCGCTGA GATCCTCAAAATTGAGGCGGAGCGTGACACGCCCCAAGACCTCCTCGCCACCGCCTTTGTGACCTCCTTCGACATGGAGC TGGAGATGGCGTTGGTACGCCGTCGAGTCGACTTCACGGTGTTGATGCCCTACTACTACGTCCACGAGGCGTCGGACGGC ACCGCTGCGACTCAGCGAGCAACGCCCCTCTGGCTCGCGACGCACGTGAAGTGGTCGGAAGTCGGATTCGCTCGCGTCGA CGCGGGCGACGATTCTTCTCTTCCCAGCCCGGTACAAGCAACGTTCACTCCGCGTTGGCGTCTTGTGAAGGGAAGCATCT CAAAGTCGGATGACCCACTCGTGGTGGTCCGGCTAGTCGGATCCCCCCTGATGCCCGCGCCCAGTCTCGAAGACGCGGCG TTCGACGTCGATGGCGAGCCATTCGATCTCCCGACAACACTTCGCGAGTTCCTCGAGTCGGAGTATGGACAAATAGGTCC GGAGGGGCCTCTGCGTGAAGGTGTCGACTTGATTCCGTCGCTCGTGCTGGACGAGTACACGGGGTTGCACCACATTCTCG CGTCGGCAAGCGGTTCCTTTCCGCTGGACCTGACTCGCGACCCAAGTGGTGTCAACGGCTTTCGTTACTGGACGTCCGTG GGGGTTCAGTTCGACGACGCACTTGTTCGGTTAATGGCTGCTTCATACCTCGATAGTTCCAGCGATGGCGTCGACCTCGT CCGCACCGGTACCAGCCCCTCGAACCGCGGAGTCATCGTGAACCGGAACCTCAGTCCTGCCGAAGCAGACGTCATGACGT GGCAGGGATTCGACGCTGTGCGTGCGCAGTACAGCGCTCTCACGTCAGATCTGGTCCACTACGCGGTTCACCTGAAGGGA GCGAACGCCGCCGCGTCCTTCAAGATCGGCAAGTGCAAGGACGTGCGCTGGCCTGGTTCGCTGCCCGCGCCGTCGGACAG CATGGCGGAGACAGCATGA
Upstream 100 bases:
>100_bases GCCGTTTCAACGTTGGAAGGCGGGTGACCGATACCGGCTACGATCTTGCCCCTGAACTAGACCGACTGATTGACCGCTGG CGGCGCTCGGAGGAGGCATC
Downstream 100 bases:
>100_bases CTGGACGACCAAGTATGGCCTCCAGTTTGAGCAAGTGGCGACAAGCATTCGAGAAACTCGATCAGACGCCCTGGCCGGGC ACGAATCGAATCGACGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 672; Mature: 671
Protein sequence:
>672_residues MTNESRTRLYEKADGSSKFYATANNNWTALLKDRTNLTRDGEAHLCTLLGRLAEPMRKQLRVKPLPEPTGLPWLTPVLGS GCLGGLSPEQSQRLKRRPREVIQALEDSVLADGSSSRNLVASLVTSLITSRIPDVVLDDFAPWDSAGHGASSPVAETIQA VALLQRAQREALALSGLAVGPTTTFQVTNPDAAAEIQVNLMEPALVHLGVALGGADTSGSTVLAASRTLLEHFKTTLEAT STDDRMRLSGRDLDVLVEIAWLLLIEPVGVYPGWRDLVASAAVQMSDGDDITSALDALDVRQPRLRVNSLESLSTIGSRL AGLGEATLSSFEEKGGDRHAFFDAIAEILKIEAERDTPQDLLATAFVTSFDMELEMALVRRRVDFTVLMPYYYVHEASDG TAATQRATPLWLATHVKWSEVGFARVDAGDDSSLPSPVQATFTPRWRLVKGSISKSDDPLVVVRLVGSPLMPAPSLEDAA FDVDGEPFDLPTTLREFLESEYGQIGPEGPLREGVDLIPSLVLDEYTGLHHILASASGSFPLDLTRDPSGVNGFRYWTSV GVQFDDALVRLMAASYLDSSSDGVDLVRTGTSPSNRGVIVNRNLSPAEADVMTWQGFDAVRAQYSALTSDLVHYAVHLKG ANAAASFKIGKCKDVRWPGSLPAPSDSMAETA
Sequences:
>Translated_672_residues MTNESRTRLYEKADGSSKFYATANNNWTALLKDRTNLTRDGEAHLCTLLGRLAEPMRKQLRVKPLPEPTGLPWLTPVLGS GCLGGLSPEQSQRLKRRPREVIQALEDSVLADGSSSRNLVASLVTSLITSRIPDVVLDDFAPWDSAGHGASSPVAETIQA VALLQRAQREALALSGLAVGPTTTFQVTNPDAAAEIQVNLMEPALVHLGVALGGADTSGSTVLAASRTLLEHFKTTLEAT STDDRMRLSGRDLDVLVEIAWLLLIEPVGVYPGWRDLVASAAVQMSDGDDITSALDALDVRQPRLRVNSLESLSTIGSRL AGLGEATLSSFEEKGGDRHAFFDAIAEILKIEAERDTPQDLLATAFVTSFDMELEMALVRRRVDFTVLMPYYYVHEASDG TAATQRATPLWLATHVKWSEVGFARVDAGDDSSLPSPVQATFTPRWRLVKGSISKSDDPLVVVRLVGSPLMPAPSLEDAA FDVDGEPFDLPTTLREFLESEYGQIGPEGPLREGVDLIPSLVLDEYTGLHHILASASGSFPLDLTRDPSGVNGFRYWTSV GVQFDDALVRLMAASYLDSSSDGVDLVRTGTSPSNRGVIVNRNLSPAEADVMTWQGFDAVRAQYSALTSDLVHYAVHLKG ANAAASFKIGKCKDVRWPGSLPAPSDSMAETA >Mature_671_residues TNESRTRLYEKADGSSKFYATANNNWTALLKDRTNLTRDGEAHLCTLLGRLAEPMRKQLRVKPLPEPTGLPWLTPVLGSG CLGGLSPEQSQRLKRRPREVIQALEDSVLADGSSSRNLVASLVTSLITSRIPDVVLDDFAPWDSAGHGASSPVAETIQAV ALLQRAQREALALSGLAVGPTTTFQVTNPDAAAEIQVNLMEPALVHLGVALGGADTSGSTVLAASRTLLEHFKTTLEATS TDDRMRLSGRDLDVLVEIAWLLLIEPVGVYPGWRDLVASAAVQMSDGDDITSALDALDVRQPRLRVNSLESLSTIGSRLA GLGEATLSSFEEKGGDRHAFFDAIAEILKIEAERDTPQDLLATAFVTSFDMELEMALVRRRVDFTVLMPYYYVHEASDGT AATQRATPLWLATHVKWSEVGFARVDAGDDSSLPSPVQATFTPRWRLVKGSISKSDDPLVVVRLVGSPLMPAPSLEDAAF DVDGEPFDLPTTLREFLESEYGQIGPEGPLREGVDLIPSLVLDEYTGLHHILASASGSFPLDLTRDPSGVNGFRYWTSVG VQFDDALVRLMAASYLDSSSDGVDLVRTGTSPSNRGVIVNRNLSPAEADVMTWQGFDAVRAQYSALTSDLVHYAVHLKGA NAAASFKIGKCKDVRWPGSLPAPSDSMAETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72423; Mature: 72292
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNESRTRLYEKADGSSKFYATANNNWTALLKDRTNLTRDGEAHLCTLLGRLAEPMRKQL CCCCHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC RVKPLPEPTGLPWLTPVLGSGCLGGLSPEQSQRLKRRPREVIQALEDSVLADGSSSRNLV CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ASLVTSLITSRIPDVVLDDFAPWDSAGHGASSPVAETIQAVALLQRAQREALALSGLAVG HHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEC PTTTFQVTNPDAAAEIQVNLMEPALVHLGVALGGADTSGSTVLAASRTLLEHFKTTLEAT CCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCC STDDRMRLSGRDLDVLVEIAWLLLIEPVGVYPGWRDLVASAAVQMSDGDDITSALDALDV CCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHC RQPRLRVNSLESLSTIGSRLAGLGEATLSSFEEKGGDRHAFFDAIAEILKIEAERDTPQD CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH LLATAFVTSFDMELEMALVRRRVDFTVLMPYYYVHEASDGTAATQRATPLWLATHVKWSE HHHHHHHHHHCHHHHHHHHHHHCCEEEEECEEEEEECCCCCCHHCCCCCEEEEECCCHHH VGFARVDAGDDSSLPSPVQATFTPRWRLVKGSISKSDDPLVVVRLVGSPLMPAPSLEDAA CCEEEECCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC FDVDGEPFDLPTTLREFLESEYGQIGPEGPLREGVDLIPSLVLDEYTGLHHILASASGSF CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLDLTRDPSGVNGFRYWTSVGVQFDDALVRLMAASYLDSSSDGVDLVRTGTSPSNRGVIV CEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEE NRNLSPAEADVMTWQGFDAVRAQYSALTSDLVHYAVHLKGANAAASFKIGKCKDVRWPGS ECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCCCCCCCCC LPAPSDSMAETA CCCCCCHHCCCC >Mature Secondary Structure TNESRTRLYEKADGSSKFYATANNNWTALLKDRTNLTRDGEAHLCTLLGRLAEPMRKQL CCCHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC RVKPLPEPTGLPWLTPVLGSGCLGGLSPEQSQRLKRRPREVIQALEDSVLADGSSSRNLV CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ASLVTSLITSRIPDVVLDDFAPWDSAGHGASSPVAETIQAVALLQRAQREALALSGLAVG HHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEC PTTTFQVTNPDAAAEIQVNLMEPALVHLGVALGGADTSGSTVLAASRTLLEHFKTTLEAT CCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCC STDDRMRLSGRDLDVLVEIAWLLLIEPVGVYPGWRDLVASAAVQMSDGDDITSALDALDV CCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHC RQPRLRVNSLESLSTIGSRLAGLGEATLSSFEEKGGDRHAFFDAIAEILKIEAERDTPQD CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH LLATAFVTSFDMELEMALVRRRVDFTVLMPYYYVHEASDGTAATQRATPLWLATHVKWSE HHHHHHHHHHCHHHHHHHHHHHCCEEEEECEEEEEECCCCCCHHCCCCCEEEEECCCHHH VGFARVDAGDDSSLPSPVQATFTPRWRLVKGSISKSDDPLVVVRLVGSPLMPAPSLEDAA CCEEEECCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC FDVDGEPFDLPTTLREFLESEYGQIGPEGPLREGVDLIPSLVLDEYTGLHHILASASGSF CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLDLTRDPSGVNGFRYWTSVGVQFDDALVRLMAASYLDSSSDGVDLVRTGTSPSNRGVIV CEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEE NRNLSPAEADVMTWQGFDAVRAQYSALTSDLVHYAVHLKGANAAASFKIGKCKDVRWPGS ECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCCCCCCCCC LPAPSDSMAETA CCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA