Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715281

Identifier: 119715281

GI number: 119715281

Start: 1097031

End: 1097981

Strand: Reverse

Name: 119715281

Synonym: Noca_1040

Alternate gene names: NA

Gene position: 1097981-1097031 (Counterclockwise)

Preceding gene: 119715285

Following gene: 119715280

Centisome position: 22.02

GC content: 63.2

Gene sequence:

>951_bases
ATGGGCGCTTTCCCATCGGACGACTTGATCGCTCAGGTCACAGACCGCACCCCAAAGGTGACTAATGGGACAGACAAGGT
CCCGCAGTCGAAGGTGACATGGAGAGGCGACAAGCGGGGGGAACGGACCTTGGACTGGGGTGATTGCCCTGGTCCCTACC
ACGCCTTCGAGTTCTTGCGCTTCGGGCTGATGGATACGAAGTCACCGAGGGAGGTGGACGCGAGGCGGAAGTCGGATCCG
GCGTCGGCCAAGCTCTACCGGCGGGGGCCGAAGGCAAAGGATTTCTTCGATCGCGAGTCGATGTACAACCTCGGTGCGCT
CTGCAAGGGCATCGGGACCGGACCTGAGGTGCAAGCCTGGATCACGGACTTCTACGACGCATACGAACTTAGCGAGTCCC
GCGGGGTAGTTGTCGTCGTCAACCGCAAGCGCACGCTGCCATTCGGAAAGGAAAGGGTGCACGCGGCAATCGCCGAAACC
CGCGGAGCATGGGGTGCGCCGCCGAAACATGCTGACGCTTCGGTCGCTCATGGAGGCGAGGAGGAGTTCAAGAGCTCCGG
TCCTCTCTGTGGCCCGAGCGGCGAGATCGAACTGGAGCAGGAAGGACGTCACTTCCGCCTGGCTGGGATTGTTCGGCCTA
CCGGCGCCCGGCAACCGTGGGGACTCCAGTTCGAGCTTCATGACGGCGAGCAGGCGATCGCGGTTAAGAAGTCAGGCGAT
GCCGACGGAGCCCTAGTGGTCGTAACCAGCCCGGCGGGCACCCGCCTGCTCCGAGCCGGACGGGATGGAGCGCTCGCAGA
TTGGGCTGTTCTAACCTCCGCTCAGGCTGCCAGGGCCAGGTTTCTTGGGGGGAATAATCTCGGGCGAGTGCGTGTGATGC
TCCTGGACCGAAGGAGCATTTCGCCGTCGTTCGCCGGACAGGAATTCGTTCGGGCCGAGGCATCCGCATGA

Upstream 100 bases:

>100_bases
GCCGCCAGGCGTCTGGGCCTGCCATGCTTCGTCCATGGCCTTCCAACCCGGTCCTGCCGTCTCAGCCCTGCTCACCCTTC
GTGAGGTGATCTCGTGGGCG

Downstream 100 bases:

>100_bases
CGGAACGGGCGGCGGTCCTCAAGAAGGTGACCGAGGAGCTCGGGGACCGCACACTCGTGTGGTCAGGGATCCGTGGGGAC
GACATCGAGCCACTACGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MGAFPSDDLIAQVTDRTPKVTNGTDKVPQSKVTWRGDKRGERTLDWGDCPGPYHAFEFLRFGLMDTKSPREVDARRKSDP
ASAKLYRRGPKAKDFFDRESMYNLGALCKGIGTGPEVQAWITDFYDAYELSESRGVVVVVNRKRTLPFGKERVHAAIAET
RGAWGAPPKHADASVAHGGEEEFKSSGPLCGPSGEIELEQEGRHFRLAGIVRPTGARQPWGLQFELHDGEQAIAVKKSGD
ADGALVVVTSPAGTRLLRAGRDGALADWAVLTSAQAARARFLGGNNLGRVRVMLLDRRSISPSFAGQEFVRAEASA

Sequences:

>Translated_316_residues
MGAFPSDDLIAQVTDRTPKVTNGTDKVPQSKVTWRGDKRGERTLDWGDCPGPYHAFEFLRFGLMDTKSPREVDARRKSDP
ASAKLYRRGPKAKDFFDRESMYNLGALCKGIGTGPEVQAWITDFYDAYELSESRGVVVVVNRKRTLPFGKERVHAAIAET
RGAWGAPPKHADASVAHGGEEEFKSSGPLCGPSGEIELEQEGRHFRLAGIVRPTGARQPWGLQFELHDGEQAIAVKKSGD
ADGALVVVTSPAGTRLLRAGRDGALADWAVLTSAQAARARFLGGNNLGRVRVMLLDRRSISPSFAGQEFVRAEASA
>Mature_315_residues
GAFPSDDLIAQVTDRTPKVTNGTDKVPQSKVTWRGDKRGERTLDWGDCPGPYHAFEFLRFGLMDTKSPREVDARRKSDPA
SAKLYRRGPKAKDFFDRESMYNLGALCKGIGTGPEVQAWITDFYDAYELSESRGVVVVVNRKRTLPFGKERVHAAIAETR
GAWGAPPKHADASVAHGGEEEFKSSGPLCGPSGEIELEQEGRHFRLAGIVRPTGARQPWGLQFELHDGEQAIAVKKSGDA
DGALVVVTSPAGTRLLRAGRDGALADWAVLTSAQAARARFLGGNNLGRVRVMLLDRRSISPSFAGQEFVRAEASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34363; Mature: 34232

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAFPSDDLIAQVTDRTPKVTNGTDKVPQSKVTWRGDKRGERTLDWGDCPGPYHAFEFLR
CCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHH
FGLMDTKSPREVDARRKSDPASAKLYRRGPKAKDFFDRESMYNLGALCKGIGTGPEVQAW
HHCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ITDFYDAYELSESRGVVVVVNRKRTLPFGKERVHAAIAETRGAWGAPPKHADASVAHGGE
HHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
EEFKSSGPLCGPSGEIELEQEGRHFRLAGIVRPTGARQPWGLQFELHDGEQAIAVKKSGD
HHHHHCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCC
ADGALVVVTSPAGTRLLRAGRDGALADWAVLTSAQAARARFLGGNNLGRVRVMLLDRRSI
CCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
SPSFAGQEFVRAEASA
CCCCCCHHHHHHCCCC
>Mature Secondary Structure 
GAFPSDDLIAQVTDRTPKVTNGTDKVPQSKVTWRGDKRGERTLDWGDCPGPYHAFEFLR
CCCCCCCHHEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHH
FGLMDTKSPREVDARRKSDPASAKLYRRGPKAKDFFDRESMYNLGALCKGIGTGPEVQAW
HHCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ITDFYDAYELSESRGVVVVVNRKRTLPFGKERVHAAIAETRGAWGAPPKHADASVAHGGE
HHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
EEFKSSGPLCGPSGEIELEQEGRHFRLAGIVRPTGARQPWGLQFELHDGEQAIAVKKSGD
HHHHHCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCC
ADGALVVVTSPAGTRLLRAGRDGALADWAVLTSAQAARARFLGGNNLGRVRVMLLDRRSI
CCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
SPSFAGQEFVRAEASA
CCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA