| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715196
Identifier: 119715196
GI number: 119715196
Start: 998921
End: 999970
Strand: Direct
Name: 119715196
Synonym: Noca_0951
Alternate gene names: NA
Gene position: 998921-999970 (Clockwise)
Preceding gene: 119715194
Following gene: 119715197
Centisome position: 20.04
GC content: 74.1
Gene sequence:
>1050_bases ATGGAGGAGCACAACGTTCCCAGGCGTTCGATCGCCGTCGGCGTGGACGCATCCGCGGAGGCGGAGAACGCGCTGGCCTG GGCGGCTGCGGAGGCCCGTCGCCGTGACCTGCCGCTGACTCTCGTGCACGGCGTGGGGCCGTCGGTGACGACCTGGATGG AGATCGGCTCGCCCAACCTCCGCGAGGTGCTGGACACGATGATCGCCGCGGGGCGGGACCTCCTCGATCGCGCGCAGGCC CGAGTGCTCGAGCTCGCTCCCGGGGTCGACACCTACCAGCTCCTCCGCCTCGCGGGACCGCACGAGGCGCTGATGGCGCT CGCGCCGGAGGCCGAGATGATCGTCGTCGGCACTCGGTCGGCCGCGTCGCGCGGGGTGCCCCTGCCCGACGTCGCGGAGA GACTGGTCGCCGAGCGCCCGCCGTGCCCGGTGATCGTGCCGCGGGCCGGCGGGTCCGATCCCAAGCTCGGCATGGTCGTT CTCTGCGACGGCTCTCCGGAGTCGCGGGTGACGCTGGTGCGCGCCTGGCGACGGGCGCGGGAGAACAGCCAGCCGTTGAC CGTGCTGCTCTGCCTGCCGGACCCTCCGGCGGACGGTCCGGCCACGGACATCGGGCTGATGGACGCGATGGCGCGCATGG AGTCCGAGCTCGGGCCGTCGCTGTTGGGATTCGAGCGGGCGCTCGTGGCCGACATGGTGGCCGAGCTGCGCAGCGCGCTC CCGGGGGTCGACGCGCAGCTGTTCGTCGATGACGCCGCCATCGACGAGTGCCTGAAGAGGGTGCCGCTCGACGCGGACAT GCTCGTGGCCGGGGCTGCCCACGCGCGACGGGTCGCGGAGGTCATCGGTGCCTCCGAGACCGACGAAGCGTGCGCGGCGG CGATCCTGCCCCCGCTGCTGCCCGAGGAGCGCGACGCTGCCGGAGCGGCCGCTGACGCATCGGATGCGGGCACGTCGGCC GCAGGTGACGGCCCGCCCGACGAGCCCACGTCGGCCGTCAGGGTGCGGGCTCGCCGGTGGACCCGCCTCGGCGCTCAACG GGGCGACTAG
Upstream 100 bases:
>100_bases GTCGATGGCGACCTGCGTTCCGCCCGGTGTGCGAGCGCACACTGAGGACGAGGGTGGGGCGCTCGACAGACGGCCGAGAG GCGCGCAGGAGGTGCCTGAC
Downstream 100 bases:
>100_bases GGGGCAACCAGTGGGCGGTCAGCGGGCGACTCGTGGGCGTTCGTGGGCCAGCGGTCGCGGCACGCGACCGATCGAGCGGA AGACGGAGACCTGGCCCGCT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP MSMEG_3950 [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MEEHNVPRRSIAVGVDASAEAENALAWAAAEARRRDLPLTLVHGVGPSVTTWMEIGSPNLREVLDTMIAAGRDLLDRAQA RVLELAPGVDTYQLLRLAGPHEALMALAPEAEMIVVGTRSAASRGVPLPDVAERLVAERPPCPVIVPRAGGSDPKLGMVV LCDGSPESRVTLVRAWRRARENSQPLTVLLCLPDPPADGPATDIGLMDAMARMESELGPSLLGFERALVADMVAELRSAL PGVDAQLFVDDAAIDECLKRVPLDADMLVAGAAHARRVAEVIGASETDEACAAAILPPLLPEERDAAGAAADASDAGTSA AGDGPPDEPTSAVRVRARRWTRLGAQRGD
Sequences:
>Translated_349_residues MEEHNVPRRSIAVGVDASAEAENALAWAAAEARRRDLPLTLVHGVGPSVTTWMEIGSPNLREVLDTMIAAGRDLLDRAQA RVLELAPGVDTYQLLRLAGPHEALMALAPEAEMIVVGTRSAASRGVPLPDVAERLVAERPPCPVIVPRAGGSDPKLGMVV LCDGSPESRVTLVRAWRRARENSQPLTVLLCLPDPPADGPATDIGLMDAMARMESELGPSLLGFERALVADMVAELRSAL PGVDAQLFVDDAAIDECLKRVPLDADMLVAGAAHARRVAEVIGASETDEACAAAILPPLLPEERDAAGAAADASDAGTSA AGDGPPDEPTSAVRVRARRWTRLGAQRGD >Mature_349_residues MEEHNVPRRSIAVGVDASAEAENALAWAAAEARRRDLPLTLVHGVGPSVTTWMEIGSPNLREVLDTMIAAGRDLLDRAQA RVLELAPGVDTYQLLRLAGPHEALMALAPEAEMIVVGTRSAASRGVPLPDVAERLVAERPPCPVIVPRAGGSDPKLGMVV LCDGSPESRVTLVRAWRRARENSQPLTVLLCLPDPPADGPATDIGLMDAMARMESELGPSLLGFERALVADMVAELRSAL PGVDAQLFVDDAAIDECLKRVPLDADMLVAGAAHARRVAEVIGASETDEACAAAILPPLLPEERDAAGAAADASDAGTSA AGDGPPDEPTSAVRVRARRWTRLGAQRGD
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 36635; Mature: 36635
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEHNVPRRSIAVGVDASAEAENALAWAAAEARRRDLPLTLVHGVGPSVTTWMEIGSPNL CCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCH REVLDTMIAAGRDLLDRAQARVLELAPGVDTYQLLRLAGPHEALMALAPEAEMIVVGTRS HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCCCEEEEECCC AASRGVPLPDVAERLVAERPPCPVIVPRAGGSDPKLGMVVLCDGSPESRVTLVRAWRRAR CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH ENSQPLTVLLCLPDPPADGPATDIGLMDAMARMESELGPSLLGFERALVADMVAELRSAL CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PGVDAQLFVDDAAIDECLKRVPLDADMLVAGAAHARRVAEVIGASETDEACAAAILPPLL CCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC PEERDAAGAAADASDAGTSAAGDGPPDEPTSAVRVRARRWTRLGAQRGD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEEHNVPRRSIAVGVDASAEAENALAWAAAEARRRDLPLTLVHGVGPSVTTWMEIGSPNL CCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCH REVLDTMIAAGRDLLDRAQARVLELAPGVDTYQLLRLAGPHEALMALAPEAEMIVVGTRS HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCCCEEEEECCC AASRGVPLPDVAERLVAERPPCPVIVPRAGGSDPKLGMVVLCDGSPESRVTLVRAWRRAR CCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH ENSQPLTVLLCLPDPPADGPATDIGLMDAMARMESELGPSLLGFERALVADMVAELRSAL CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PGVDAQLFVDDAAIDECLKRVPLDADMLVAGAAHARRVAEVIGASETDEACAAAILPPLL CCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC PEERDAAGAAADASDAGTSAAGDGPPDEPTSAVRVRARRWTRLGAQRGD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA