| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715197
Identifier: 119715197
GI number: 119715197
Start: 1000098
End: 1001486
Strand: Direct
Name: 119715197
Synonym: Noca_0952
Alternate gene names: NA
Gene position: 1000098-1001486 (Clockwise)
Preceding gene: 119715196
Following gene: 119715198
Centisome position: 20.06
GC content: 72.07
Gene sequence:
>1389_bases GTGACCTCGGCTCCTTCCCCGAAGACGGTCGGCGAGCTCCGCGCCTCCGGCCACGTCCAGAAGCACCTGCGCCAGGAGGT CCGCGACAACCTGCTCGCGGCGCTGCGCGAGGGGCGCGACCCGTGGCCGGGGCTGCACGGTTTCGAGGACACGGTGATCC CCCAGCTCGAGCGGGCGCTGATCGCCGGCCACGACGTGGTGCTGCTCGGCGAGCGCGGCCAGGGCAAGACCCGGCTGCTG CGCACCCTGGTCGGCCTGCTCGACGAGTGGACGCCGGTGATCGAGGGCTCCGAGCTCGGCGAGCACCCCTACGACCCGAT CACCCACGCCGCGCAACGGCGGGCGGCCGAGCTGGGCGACGACCTGCCGGTCGCGTGGCGGCACCGCGACGAGCGCTACT CCGAGAAGCTCGCGACGCCGGACACCTCGGTCGCGGACCTGATCGGCGACGTCGACCCGATGAAGGTCGCCGAGGGTCGC TCGCTGGGGGACCCGGAGACCATCCACTTCGGGCTGATCCCCCGCAGCCACCGGGGCATCGTCGCCATCAACGAGCTGCC CGACCTCGCCGAGCGGATCCAGGTCGCGATGCTCAACGTGATGGAGGAGCGCGACATCCAGATCCGCGGCTACGTGCTGC GGCTGCCACTCGACGTGCTCGTCGTCGCCAGCGCGAACCCCGAGGACTACACCAACCGCGGCCGGATCATCACCCCGCTC AAGGACCGGTTCGGCGCCGAGATCCGCACCCACTACCCGACCGAGCTGGACGACGAGGTGGCCGTGATCCGGCAGGAGGC CGACCTGGTCGCCGACGTGCCCGACCAGCTCGTCGAGATCCTGGCCCGCTTCACCCGGGCGCTGCGCGCCTCCAGCGCCG TCGACCAACGCTCGGGCGTCTCGGCGCGGTTCGCGATCGCCGGGGCCGAGACCGTCGCCGCCGCGGCGTTGCATCGCGCC ACCTCGCAGGGCGAGGACCGGGCGGTGGCCCGGGTCGTCGACCTCGAGACCGCGGTCGACGTGCTCGGCGGCAAGATCGA GTTCGAGAGCGGCGAGGAGGGCCGGGAGGCCGAGATCCTCACTCACCTGCTCCGCACGTCCACGGCCGAGACCGTGCGTC ACCACTTCCGCGGACTCGACTTCGCGCTGCTCGTCGCCGCGATCGAGAACGGCGCGATGGTCACCACCGGTGAGCAGGTC ACCGCCCGCGACTTCCTCACCGGCCTGCCCGTGCTCGGCGAGTCCGAGCTGTACGACGAGATCTGCGACCGGTTCGAGGC CGGCAACGACGGCGAGCGCGCGTGCGCGATCGAGCTCGCCCTGGAGGGGCTGTACCTCGCCCGCAAGATCGGCAAGGACA CCGACGGAGCAGAGACGGTGTACGGCTAG
Upstream 100 bases:
>100_bases GACTCGTGGGCGTTCGTGGGCCAGCGGTCGCGGCACGCGACCGATCGAGCGGAAGACGGAGACCTGGCCCGCTTGTTGGC GCCGTGGGTAGCGTGGTGAC
Downstream 100 bases:
>100_bases TGAAGGACCGGACCCGGTTCAAGCGGTACGACGGCGGACCGGACCCGCTCGCGCCGCCCGTCGACCTGGCCGAGGCCCTG GACGCCATCGGCGAGGACGT
Product: putative magnesium chelatase subunit ChlI
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: Magnesium Chelatase; Magnesium Chelatase Subunit ChlI; Magnesium Chelatase ChlI Subunit; Mg-Chelatase Subunit ChlI-Like Protein; Mg-Chelatase Subunit ChlI; Magnesium-Chelatase Subunit ChlI; Magnesium Chelatase Subunit Chll; Magnesium Chelatase Subunit ChlI Family Protein; Magnesium Chelatase Related Protein; Magnesium-Chelatase Subunit Chli; Mg-Chelatase Subunit; Magnesium Chelatase Subunit ChlI Family; Magnesium Chelatase Subunit Chli; Mg-Chelatase Subunit Chli-Like Protein; Mg-Chelatase Subunit ChlI /Chld; LOW QUALITY PROTEIN Magnesium Chelatase
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTSAPSPKTVGELRASGHVQKHLRQEVRDNLLAALREGRDPWPGLHGFEDTVIPQLERALIAGHDVVLLGERGQGKTRLL RTLVGLLDEWTPVIEGSELGEHPYDPITHAAQRRAAELGDDLPVAWRHRDERYSEKLATPDTSVADLIGDVDPMKVAEGR SLGDPETIHFGLIPRSHRGIVAINELPDLAERIQVAMLNVMEERDIQIRGYVLRLPLDVLVVASANPEDYTNRGRIITPL KDRFGAEIRTHYPTELDDEVAVIRQEADLVADVPDQLVEILARFTRALRASSAVDQRSGVSARFAIAGAETVAAAALHRA TSQGEDRAVARVVDLETAVDVLGGKIEFESGEEGREAEILTHLLRTSTAETVRHHFRGLDFALLVAAIENGAMVTTGEQV TARDFLTGLPVLGESELYDEICDRFEAGNDGERACAIELALEGLYLARKIGKDTDGAETVYG
Sequences:
>Translated_462_residues MTSAPSPKTVGELRASGHVQKHLRQEVRDNLLAALREGRDPWPGLHGFEDTVIPQLERALIAGHDVVLLGERGQGKTRLL RTLVGLLDEWTPVIEGSELGEHPYDPITHAAQRRAAELGDDLPVAWRHRDERYSEKLATPDTSVADLIGDVDPMKVAEGR SLGDPETIHFGLIPRSHRGIVAINELPDLAERIQVAMLNVMEERDIQIRGYVLRLPLDVLVVASANPEDYTNRGRIITPL KDRFGAEIRTHYPTELDDEVAVIRQEADLVADVPDQLVEILARFTRALRASSAVDQRSGVSARFAIAGAETVAAAALHRA TSQGEDRAVARVVDLETAVDVLGGKIEFESGEEGREAEILTHLLRTSTAETVRHHFRGLDFALLVAAIENGAMVTTGEQV TARDFLTGLPVLGESELYDEICDRFEAGNDGERACAIELALEGLYLARKIGKDTDGAETVYG >Mature_461_residues TSAPSPKTVGELRASGHVQKHLRQEVRDNLLAALREGRDPWPGLHGFEDTVIPQLERALIAGHDVVLLGERGQGKTRLLR TLVGLLDEWTPVIEGSELGEHPYDPITHAAQRRAAELGDDLPVAWRHRDERYSEKLATPDTSVADLIGDVDPMKVAEGRS LGDPETIHFGLIPRSHRGIVAINELPDLAERIQVAMLNVMEERDIQIRGYVLRLPLDVLVVASANPEDYTNRGRIITPLK DRFGAEIRTHYPTELDDEVAVIRQEADLVADVPDQLVEILARFTRALRASSAVDQRSGVSARFAIAGAETVAAAALHRAT SQGEDRAVARVVDLETAVDVLGGKIEFESGEEGREAEILTHLLRTSTAETVRHHFRGLDFALLVAAIENGAMVTTGEQVT ARDFLTGLPVLGESELYDEICDRFEAGNDGERACAIELALEGLYLARKIGKDTDGAETVYG
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.6.1.1
Molecular weight: Translated: 50567; Mature: 50435
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAPSPKTVGELRASGHVQKHLRQEVRDNLLAALREGRDPWPGLHGFEDTVIPQLERAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH IAGHDVVLLGERGQGKTRLLRTLVGLLDEWTPVIEGSELGEHPYDPITHAAQRRAAELGD HCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC DLPVAWRHRDERYSEKLATPDTSVADLIGDVDPMKVAEGRSLGDPETIHFGLIPRSHRGI CCCHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCE VAINELPDLAERIQVAMLNVMEERDIQIRGYVLRLPLDVLVVASANPEDYTNRGRIITPL EEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEEEEEECCCCCCCCCCCEEECCH KDRFGAEIRTHYPTELDDEVAVIRQEADLVADVPDQLVEILARFTRALRASSAVDQRSGV HHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SARFAIAGAETVAAAALHRATSQGEDRAVARVVDLETAVDVLGGKIEFESGEEGREAEIL CEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHH THLLRTSTAETVRHHFRGLDFALLVAAIENGAMVTTGEQVTARDFLTGLPVLGESELYDE HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHH ICDRFEAGNDGERACAIELALEGLYLARKIGKDTDGAETVYG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSAPSPKTVGELRASGHVQKHLRQEVRDNLLAALREGRDPWPGLHGFEDTVIPQLERAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH IAGHDVVLLGERGQGKTRLLRTLVGLLDEWTPVIEGSELGEHPYDPITHAAQRRAAELGD HCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC DLPVAWRHRDERYSEKLATPDTSVADLIGDVDPMKVAEGRSLGDPETIHFGLIPRSHRGI CCCHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCE VAINELPDLAERIQVAMLNVMEERDIQIRGYVLRLPLDVLVVASANPEDYTNRGRIITPL EEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEEEEEECCCCCCCCCCCEEECCH KDRFGAEIRTHYPTELDDEVAVIRQEADLVADVPDQLVEILARFTRALRASSAVDQRSGV HHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SARFAIAGAETVAAAALHRATSQGEDRAVARVVDLETAVDVLGGKIEFESGEEGREAEIL CEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHH THLLRTSTAETVRHHFRGLDFALLVAAIENGAMVTTGEQVTARDFLTGLPVLGESELYDE HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHH ICDRFEAGNDGERACAIELALEGLYLARKIGKDTDGAETVYG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA