Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715194

Identifier: 119715194

GI number: 119715194

Start: 997994

End: 998392

Strand: Direct

Name: 119715194

Synonym: Noca_0949

Alternate gene names: NA

Gene position: 997994-998392 (Clockwise)

Preceding gene: 119715193

Following gene: 119715196

Centisome position: 20.02

GC content: 73.68

Gene sequence:

>399_bases
GTGATCGCGGTGTCGACGATCATGTCGCGCCGCCTGGTCGCCATCCTGTCCGACTGCGACCTGACGGTCGCGGTCGACAC
CTTCCTGGCCGCCGGCGTGCGTCACCTGGTCGTCGTCGACCCGGACCGGACGGTCCGTGGCCTGTTGTCGGTCGACCAGG
TGCTGGCCGCGCTCGGGCTGCCCGGCTGGCCGGGTCGCGTCGGCGACCAGGTGCTCCTGGAGCCGCCGCGGGTGAGCCCC
GACGACGACCTCCACCACGCGGCGGAGGTGATGCTGGACGCGCTCGTCGACGCGGTCGTGGTCGCCGACGGGACCGGGAA
GGTCGTGGGGCTGCTCACCTGGGCCGATCTGGTGACGCACGTCGCGGGGCGCCACCTCGCCGGTGACGGCGCGACCTAG

Upstream 100 bases:

>100_bases
CGGCACGCTGACGACCCTGCTCTACGGGTCGATCGCGAACGCGGTGCTGGAGCACGCCACCTGCCCGGTCGCGATCGTCC
CGGAGTCGGAGGGCTGACCC

Downstream 100 bases:

>100_bases
CCCACGTCGCCGTCGACGTACACCCACCGGCCGCCGCGTTGCTCGAACCGGCTGCGCTCGCGCAGCTCGCCGGGCACCCC
GCCGTGCTCGTACGACGCCA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGLPGWPGRVGDQVLLEPPRVSP
DDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTHVAGRHLAGDGAT

Sequences:

>Translated_132_residues
MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGLPGWPGRVGDQVLLEPPRVSP
DDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTHVAGRHLAGDGAT
>Mature_132_residues
MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGLPGWPGRVGDQVLLEPPRVSP
DDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTHVAGRHLAGDGAT

Specific function: Unknown

COG id: COG2524

COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13757; Mature: 13757

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGL
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHEEEEECCCHHHHHHHHHHHHHHHHCC
PGWPGRVGDQVLLEPPRVSPDDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTH
CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
VAGRHLAGDGAT
HHCCCCCCCCCC
>Mature Secondary Structure
MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGL
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHEEEEECCCHHHHHHHHHHHHHHHHCC
PGWPGRVGDQVLLEPPRVSPDDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTH
CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
VAGRHLAGDGAT
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA