| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715194
Identifier: 119715194
GI number: 119715194
Start: 997994
End: 998392
Strand: Direct
Name: 119715194
Synonym: Noca_0949
Alternate gene names: NA
Gene position: 997994-998392 (Clockwise)
Preceding gene: 119715193
Following gene: 119715196
Centisome position: 20.02
GC content: 73.68
Gene sequence:
>399_bases GTGATCGCGGTGTCGACGATCATGTCGCGCCGCCTGGTCGCCATCCTGTCCGACTGCGACCTGACGGTCGCGGTCGACAC CTTCCTGGCCGCCGGCGTGCGTCACCTGGTCGTCGTCGACCCGGACCGGACGGTCCGTGGCCTGTTGTCGGTCGACCAGG TGCTGGCCGCGCTCGGGCTGCCCGGCTGGCCGGGTCGCGTCGGCGACCAGGTGCTCCTGGAGCCGCCGCGGGTGAGCCCC GACGACGACCTCCACCACGCGGCGGAGGTGATGCTGGACGCGCTCGTCGACGCGGTCGTGGTCGCCGACGGGACCGGGAA GGTCGTGGGGCTGCTCACCTGGGCCGATCTGGTGACGCACGTCGCGGGGCGCCACCTCGCCGGTGACGGCGCGACCTAG
Upstream 100 bases:
>100_bases CGGCACGCTGACGACCCTGCTCTACGGGTCGATCGCGAACGCGGTGCTGGAGCACGCCACCTGCCCGGTCGCGATCGTCC CGGAGTCGGAGGGCTGACCC
Downstream 100 bases:
>100_bases CCCACGTCGCCGTCGACGTACACCCACCGGCCGCCGCGTTGCTCGAACCGGCTGCGCTCGCGCAGCTCGCCGGGCACCCC GCCGTGCTCGTACGACGCCA
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGLPGWPGRVGDQVLLEPPRVSP DDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTHVAGRHLAGDGAT
Sequences:
>Translated_132_residues MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGLPGWPGRVGDQVLLEPPRVSP DDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTHVAGRHLAGDGAT >Mature_132_residues MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGLPGWPGRVGDQVLLEPPRVSP DDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTHVAGRHLAGDGAT
Specific function: Unknown
COG id: COG2524
COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13757; Mature: 13757
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHEEEEECCCHHHHHHHHHHHHHHHHCC PGWPGRVGDQVLLEPPRVSPDDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTH CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VAGRHLAGDGAT HHCCCCCCCCCC >Mature Secondary Structure MIAVSTIMSRRLVAILSDCDLTVAVDTFLAAGVRHLVVVDPDRTVRGLLSVDQVLAALGL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHEEEEECCCHHHHHHHHHHHHHHHHCC PGWPGRVGDQVLLEPPRVSPDDDLHHAAEVMLDALVDAVVVADGTGKVVGLLTWADLVTH CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VAGRHLAGDGAT HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA