| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715181
Identifier: 119715181
GI number: 119715181
Start: 981605
End: 982429
Strand: Direct
Name: 119715181
Synonym: Noca_0936
Alternate gene names: NA
Gene position: 981605-982429 (Clockwise)
Preceding gene: 119715180
Following gene: 119715182
Centisome position: 19.69
GC content: 74.06
Gene sequence:
>825_bases ATGCCTCCTCTCTGGTCCCGCCGCGCCCTGACCCGTGCCAGCGCAAGCGCAGGACGGGCCGCGCCGGACCGGCCGGCCGG CCCACCGAGCGCCGCACCCGCCGGATCGCGCCGGCTGGCAGCCGGCTTCTTCGAGCGGTTCCCGGCCTTCTACGACACCA GCGAGACCTCGTCCTTCCCCTGGCGCCTGAACCTGCGCCACGAGGCGATCTTCACCGAGCACGACGACCTGTTCCCCGGC GCGCGCGTCCTCGACATCGCCAGCCACGACGGACGCTGGTCGATGGCCGCCCTCGAGGCCGGCGCCGCCTCCGTGATCGG AGTCGAGGCGCGGCCCGAGCTCGTCGACCGTGCGGTCGACACGCTGCGTCGCCTCGACGTCGACGAGGCCCGCTTCCGGT TCGTCGCCGGCGACGCCTTCGAGGTGCTCGCCCGCGAGGAGCCCCAGGTCGACGTGGTGCTCTGCCTCGGCTTCCTCTAC CACACGCTGCGCCACAACGAGCTGTTCACCCGGATCCGCCGGACCGGGGCGCGGCACCTGTTGCTCGACACCGAGATCCA CCGCGGGACCGAGCCGGTCGTGCGCCTCGCCGACGAGCACGTGGACCGGCAGGGCAACGCGGTCGCGGACGAGTTCTCCT ACGGCGACACGGTGCTCACCGGCCGTCCCACCCTCGCCGCGCTCGACCTGCTGGCCCGGACCCAGGGCTTCGCCGTGGAG CGGCTCTCGGACTGGGACGGGCTGCTGCGCGACAACCCCGAGGCCGACCAGGTCCGCGACTACCGGATCGGTCGGCGCGC GACCCTGCGCCTGCGCCGGGCCTGA
Upstream 100 bases:
>100_bases TGATGGACGGGACGATCCCGGTCACCAGTGTCCCGGGCGAGGGGACGGCGTTCCGCGTGCGCCTGCCGCTGGCGGCCGCG TAGCCGCCTACGATCAACCG
Downstream 100 bases:
>100_bases GTCCAGTCACCTCCGGCCGGGCAGGTCGTTGGTCGGTCGTGCGCAGACTCCTGCTGGCGGCCCTGGTGGCGGTCGCCCTC GTGCTGACCGCCGCCCCGTT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPPLWSRRALTRASASAGRAAPDRPAGPPSAAPAGSRRLAAGFFERFPAFYDTSETSSFPWRLNLRHEAIFTEHDDLFPG ARVLDIASHDGRWSMAALEAGAASVIGVEARPELVDRAVDTLRRLDVDEARFRFVAGDAFEVLAREEPQVDVVLCLGFLY HTLRHNELFTRIRRTGARHLLLDTEIHRGTEPVVRLADEHVDRQGNAVADEFSYGDTVLTGRPTLAALDLLARTQGFAVE RLSDWDGLLRDNPEADQVRDYRIGRRATLRLRRA
Sequences:
>Translated_274_residues MPPLWSRRALTRASASAGRAAPDRPAGPPSAAPAGSRRLAAGFFERFPAFYDTSETSSFPWRLNLRHEAIFTEHDDLFPG ARVLDIASHDGRWSMAALEAGAASVIGVEARPELVDRAVDTLRRLDVDEARFRFVAGDAFEVLAREEPQVDVVLCLGFLY HTLRHNELFTRIRRTGARHLLLDTEIHRGTEPVVRLADEHVDRQGNAVADEFSYGDTVLTGRPTLAALDLLARTQGFAVE RLSDWDGLLRDNPEADQVRDYRIGRRATLRLRRA >Mature_273_residues PPLWSRRALTRASASAGRAAPDRPAGPPSAAPAGSRRLAAGFFERFPAFYDTSETSSFPWRLNLRHEAIFTEHDDLFPGA RVLDIASHDGRWSMAALEAGAASVIGVEARPELVDRAVDTLRRLDVDEARFRFVAGDAFEVLAREEPQVDVVLCLGFLYH TLRHNELFTRIRRTGARHLLLDTEIHRGTEPVVRLADEHVDRQGNAVADEFSYGDTVLTGRPTLAALDLLARTQGFAVER LSDWDGLLRDNPEADQVRDYRIGRRATLRLRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30619; Mature: 30488
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLWSRRALTRASASAGRAAPDRPAGPPSAAPAGSRRLAAGFFERFPAFYDTSETSSFP CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC WRLNLRHEAIFTEHDDLFPGARVLDIASHDGRWSMAALEAGAASVIGVEARPELVDRAVD EEEECCHHEEECCCCCCCCCCEEEEECCCCCCEEHHHHHCCCCEEEECCCCHHHHHHHHH TLRRLDVDEARFRFVAGDAFEVLAREEPQVDVVLCLGFLYHTLRHNELFTRIRRTGARHL HHHHCCCCHHHEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LLDTEIHRGTEPVVRLADEHVDRQGNAVADEFSYGDTVLTGRPTLAALDLLARTQGFAVE EEECHHHCCCHHHHHHHHHHHCCCCCEEHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHH RLSDWDGLLRDNPEADQVRDYRIGRRATLRLRRA HHHHHHHHHCCCCCHHHHHHHHCCCHHEEEEECC >Mature Secondary Structure PPLWSRRALTRASASAGRAAPDRPAGPPSAAPAGSRRLAAGFFERFPAFYDTSETSSFP CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC WRLNLRHEAIFTEHDDLFPGARVLDIASHDGRWSMAALEAGAASVIGVEARPELVDRAVD EEEECCHHEEECCCCCCCCCCEEEEECCCCCCEEHHHHHCCCCEEEECCCCHHHHHHHHH TLRRLDVDEARFRFVAGDAFEVLAREEPQVDVVLCLGFLYHTLRHNELFTRIRRTGARHL HHHHCCCCHHHEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LLDTEIHRGTEPVVRLADEHVDRQGNAVADEFSYGDTVLTGRPTLAALDLLARTQGFAVE EEECHHHCCCHHHHHHHHHHHCCCCCEEHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHH RLSDWDGLLRDNPEADQVRDYRIGRRATLRLRRA HHHHHHHHHCCCCCHHHHHHHHCCCHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA