| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715182
Identifier: 119715182
GI number: 119715182
Start: 982796
End: 983680
Strand: Direct
Name: 119715182
Synonym: Noca_0937
Alternate gene names: NA
Gene position: 982796-983680 (Clockwise)
Preceding gene: 119715181
Following gene: 119715184
Centisome position: 19.71
GC content: 67.68
Gene sequence:
>885_bases ATGCAGAGCAACAACCCTGTGTTCCGCCGGTCGGAGGAGTTCCACGCCTCCGGCTCCAACGCCTACGGCAACCAGACGTA CGCCGGCAACGGGTCGGCGTACCAGGGCTACGGCCAGACCGGCTACACCGACCCCGCGACCTGGGGCACCGGCACGCCCG GCCAGCCCGGCGTCAGCCAGCCGGGGACCGCCATCGACCGCGGCCCGATGACCATCGACTCGGTCGTGCAGAAGACCGCG ATCTCGCTCGGCCTGGTGATCGTGGCCGCGCTCGCCACCTGGGTGCTGACCCCCGACATCGAGAACGGCCAGATCAGCGG CGGCCTCGTCGCGGCGGTGACCCTCGGGTCCCTGGGCGCGTTCGTGCTCTCGATGGTGAACTCGTTCAAGCGGGTGATCA GCCCGGCGCTCGTCATGGCGTTCGCCGTCCTGGAGGGCATCGCCCTGGGTGGGCTGAGCAAGCTCTTCGACGTCCAGTTC GGTGACGGCGTCGTCTCCGGCGCCGTGATCGGCACGTTCGCGGCGTTCGCCGGCACGCTCGCGGCGTACAAGGTGTTCGA CATCAAGGTCGGCAACAAGTTCCGCATGTTCGTGATGGCGGCTGTCTTCGGCATGATCGGGCTCAGCCTGATGGAGCTGG TGCTGAGCATGTTCAGCGCGAGCATCGGCCTGTTCGGCTTCGGCACGCTCGGCATGCTGACCGCGATCGTCGGCCTCGCG CTGGGCGTGTTCATGCTGGTCCTCGACTTCGACTTCGTCGAGCAGGGCATCGCCAACCGGCTCCCCGAGCAGGAGTCCTG GCGGGCCGCCTTCGCGATGACCGTCAGCCTGGTCTGGATCTACACCAACCTGCTGCGCCTGCTGGCGATCTTCAGCGACA ACTGA
Upstream 100 bases:
>100_bases CAATCGACCCACGGAAGCGTTCAACCCGGTGAGCCCGCCTAGACTGGGCCCAACAGGTGACCCGTCAGAGCGACGACACC CCCGGCCTCGAGGAGAGACC
Downstream 100 bases:
>100_bases AGCTGCCTGCGCCGAAGGGCCCCGGGGTTCCTCCCCGGGGCCCTTCGGCGTGTCGTGCGGCTTTCGGCTGCCAGGTGGGA CCTGAGGGGCTGGTGGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MQSNNPVFRRSEEFHASGSNAYGNQTYAGNGSAYQGYGQTGYTDPATWGTGTPGQPGVSQPGTAIDRGPMTIDSVVQKTA ISLGLVIVAALATWVLTPDIENGQISGGLVAAVTLGSLGAFVLSMVNSFKRVISPALVMAFAVLEGIALGGLSKLFDVQF GDGVVSGAVIGTFAAFAGTLAAYKVFDIKVGNKFRMFVMAAVFGMIGLSLMELVLSMFSASIGLFGFGTLGMLTAIVGLA LGVFMLVLDFDFVEQGIANRLPEQESWRAAFAMTVSLVWIYTNLLRLLAIFSDN
Sequences:
>Translated_294_residues MQSNNPVFRRSEEFHASGSNAYGNQTYAGNGSAYQGYGQTGYTDPATWGTGTPGQPGVSQPGTAIDRGPMTIDSVVQKTA ISLGLVIVAALATWVLTPDIENGQISGGLVAAVTLGSLGAFVLSMVNSFKRVISPALVMAFAVLEGIALGGLSKLFDVQF GDGVVSGAVIGTFAAFAGTLAAYKVFDIKVGNKFRMFVMAAVFGMIGLSLMELVLSMFSASIGLFGFGTLGMLTAIVGLA LGVFMLVLDFDFVEQGIANRLPEQESWRAAFAMTVSLVWIYTNLLRLLAIFSDN >Mature_294_residues MQSNNPVFRRSEEFHASGSNAYGNQTYAGNGSAYQGYGQTGYTDPATWGTGTPGQPGVSQPGTAIDRGPMTIDSVVQKTA ISLGLVIVAALATWVLTPDIENGQISGGLVAAVTLGSLGAFVLSMVNSFKRVISPALVMAFAVLEGIALGGLSKLFDVQF GDGVVSGAVIGTFAAFAGTLAAYKVFDIKVGNKFRMFVMAAVFGMIGLSLMELVLSMFSASIGLFGFGTLGMLTAIVGLA LGVFMLVLDFDFVEQGIANRLPEQESWRAAFAMTVSLVWIYTNLLRLLAIFSDN
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30834; Mature: 30834
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSNNPVFRRSEEFHASGSNAYGNQTYAGNGSAYQGYGQTGYTDPATWGTGTPGQPGVSQ CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGTAIDRGPMTIDSVVQKTAISLGLVIVAALATWVLTPDIENGQISGGLVAAVTLGSLGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FVLSMVNSFKRVISPALVMAFAVLEGIALGGLSKLFDVQFGDGVVSGAVIGTFAAFAGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AAYKVFDIKVGNKFRMFVMAAVFGMIGLSLMELVLSMFSASIGLFGFGTLGMLTAIVGLA HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVFMLVLDFDFVEQGIANRLPEQESWRAAFAMTVSLVWIYTNLLRLLAIFSDN HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSNNPVFRRSEEFHASGSNAYGNQTYAGNGSAYQGYGQTGYTDPATWGTGTPGQPGVSQ CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGTAIDRGPMTIDSVVQKTAISLGLVIVAALATWVLTPDIENGQISGGLVAAVTLGSLGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FVLSMVNSFKRVISPALVMAFAVLEGIALGGLSKLFDVQFGDGVVSGAVIGTFAAFAGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AAYKVFDIKVGNKFRMFVMAAVFGMIGLSLMELVLSMFSASIGLFGFGTLGMLTAIVGLA HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVFMLVLDFDFVEQGIANRLPEQESWRAAFAMTVSLVWIYTNLLRLLAIFSDN HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA