Click here to switch to the map view.

The map label for this gene is 119715180

Identifier: 119715180

GI number: 119715180

Start: 980491

End: 981345

Strand: Direct

Name: 119715180

Synonym: Noca_0935

Alternate gene names: NA

Gene position: 980491-981345 (Clockwise)

Preceding gene: 119715179

Following gene: 119715181

Centisome position: 19.67

GC content: 75.79

Gene sequence:

>855_bases
GTGACCGACCTGCTCCCGCACCCCGCCACCCGGGAGCTGTTCCCGTCCCCGGTGCCGCCCGGCACCGGGTGGCCGGGCGA
TCCCGCGACGGAGCGGACACCGGTCGCCACGACCGCGGCGCAGGTGCGCCGGCTGGCCCGGGTCGGCGAAGGGGTCGACG
AGCTGGCCGAGCTCGACGCGCGGGTCTCGGTCTGCCGGGCCTGCCCGCGCCTGGTTCGCTGGCGCGAGGACGTGGCCCGG
GACAAGCGCGCGTCCTTCGCCACCGAGCCCTACTGGGGCCGACCGGTCCCCGGCTGGGGCACCACCGACCCGAGCGTGCT
GATCGTCGGGCTCGCCCCGGCCGCGAACGGTGCCAACCGGACCGGCCGGATCTTCACCGGCGACCGCAGCGGCGACTGGC
TGTTCGCGGGGCTGCACCGCGTCGGCCTGGCCCGCACCGCTACGAGCACGCACGCCGACGACGGCCAGGAGCTGATCGGC
ACCAGGATGATCGCCACGGTGCGCTGCGCGCCGCCGCAGAACAAGCCGACCGTCGTGGAGCGGGACACCTGCGCCCCCTG
GCTGCTCGCCGAGCTGGGCCTGGTGCTGCCGACGGTCGAGGTGGTGGTCGCGCTCGGCACCTTCGGCTGGGACGCCACGC
TGCGCTCGTTCGCCGGGCTGGGCTGGCAGGCCAGCCGACCGCGGCCGCGGTTCGGCCACGGCGTGGAGACCCGCCTGGTC
GGGCCGGGCCGCGAGGTGACGCTGCTGGGCTGCTACCACCCGAGCCAGCAGAACACCTTCACCGGCCGGCTCACCGAGGT
GATGCTCGACGACGTCCTGCGCCGCGCTGCCGTTCTTGGCAGGATCACGGGGTAG

Upstream 100 bases:

>100_bases
GCCGACAAGGTACGGCGCGAGGCGTCGATCCAACCCGCACCCTGACCGATCCGGGTCCGCCCGGTCGGCGCACGCCAGCA
GGGTGCGCGAGGATGGCCGG

Downstream 100 bases:

>100_bases
GCCGACCGGCCCCCGTATCCCAACCGGCAGAGGAAGCCGCCTTAAAAGCGGCGCAGTCTGGGTTCGAGTCCCAGCGGGGG
CACCACGCGGATCCCTCGAC

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTDLLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDARVSVCRACPRLVRWREDVAR
DKRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANRTGRIFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIG
TRMIATVRCAPPQNKPTVVERDTCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLV
GPGREVTLLGCYHPSQQNTFTGRLTEVMLDDVLRRAAVLGRITG

Sequences:

>Translated_284_residues
MTDLLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDARVSVCRACPRLVRWREDVAR
DKRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANRTGRIFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIG
TRMIATVRCAPPQNKPTVVERDTCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLV
GPGREVTLLGCYHPSQQNTFTGRLTEVMLDDVLRRAAVLGRITG
>Mature_283_residues
TDLLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDARVSVCRACPRLVRWREDVARD
KRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANRTGRIFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIGT
RMIATVRCAPPQNKPTVVERDTCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLVG
PGREVTLLGCYHPSQQNTFTGRLTEVMLDDVLRRAAVLGRITG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 30664; Mature: 30533

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDA
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
RVSVCRACPRLVRWREDVARDKRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
TGRIFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIGTRMIATVRCAPPQNKPTVVE
CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEEE
RDTCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
GPGREVTLLGCYHPSQQNTFTGRLTEVMLDDVLRRAAVLGRITG
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDLLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDA
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
RVSVCRACPRLVRWREDVARDKRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
TGRIFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIGTRMIATVRCAPPQNKPTVVE
CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEEE
RDTCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
GPGREVTLLGCYHPSQQNTFTGRLTEVMLDDVLRRAAVLGRITG
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]