| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715138
Identifier: 119715138
GI number: 119715138
Start: 933191
End: 933991
Strand: Direct
Name: 119715138
Synonym: Noca_0893
Alternate gene names: NA
Gene position: 933191-933991 (Clockwise)
Preceding gene: 119715137
Following gene: 119715139
Centisome position: 18.72
GC content: 72.41
Gene sequence:
>801_bases GTGAGGGCCGCCCTGGTCGCGGAGTACCGCAAGCTCGTCAGCACCCGGATGTGGTGGCTGCTGCTGATCGTCCTGGCCGG CTACCTCGTGTTCATCGGCGTCGTGATGGCCGCCTCCTTCGTGTTCGCTCCCGAGGACGGGAGCGATGCGGCTCCGCTGG AAGGGGTGGCGGCGGCGCGGGCGATCTACGGGCTCACCAACGCCGTCGGCTACGTGTTCCCGCTGGTCATCGGCAGCCTG GCGATCACCACCGAGTTCCGGCACCAGACCATCACCGAGACGCTGCTCGTCGAGCCCCGGCGCGGCGTACTGCTCGTGGC GAAGCTGCTCGCCACCATCCCGATCGGCCTGCTCTACGGGGTCGTCGGCACGCTCGCGGTCGTCGGCGCCAGCGCGCCGC TGCTCGCCGGCTGGGGCGACGGCGCGTTCCTCGGCGACCGCTCCGTGCTGGCGGTGCTGGCGCTCGGCGTGGTCGTCACC GTGCTGTGGGCGATGATCGGCACCGCGTTCGGCAGCGTGGTCCCCAACCAGGTGGCCGCGATCGTCGTGATCCTGGCGTT CACGCAGTTCGTCGAGCCGATCGCGCGCCTGGCGCTCGGGGCGTTCGACGGCACCGACGCGATCGCGCGGTTCCTGCCCG GTGCGGCCGCCGACGGGCTGATCGGCTCGAGCCTGTTCGGCGAGCTGGGCGGCTCCGGTGAGCTGCTGTCCCGACCGGTC GCCCTCGTGGTGCTGGTCGCGTACGCCGGCGGGCTCGCGCTGCTCGGCCGGTTCACCACCCTGCGGCGCGACGTCGTGTG A
Upstream 100 bases:
>100_bases GGGCGGCGGCGTACGCCGCGGGGCTCGAGTTGCACCAGCTCGCCAGTCGTGGCGTTGGGCTCGAGGACGTCTTCCTGCGC CTCACCGGGGGTGCTCGGTC
Downstream 100 bases:
>100_bases TGCCGAGGCGGCGCATCTTGCTCACGAGGCGGGCAAGATGCGCCGACTCGAGGCTGCTGGGCGGGCAAGATGCGCCGACT CGGCAGGGCGCCGGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MRAALVAEYRKLVSTRMWWLLLIVLAGYLVFIGVVMAASFVFAPEDGSDAAPLEGVAAARAIYGLTNAVGYVFPLVIGSL AITTEFRHQTITETLLVEPRRGVLLVAKLLATIPIGLLYGVVGTLAVVGASAPLLAGWGDGAFLGDRSVLAVLALGVVVT VLWAMIGTAFGSVVPNQVAAIVVILAFTQFVEPIARLALGAFDGTDAIARFLPGAAADGLIGSSLFGELGGSGELLSRPV ALVVLVAYAGGLALLGRFTTLRRDVV
Sequences:
>Translated_266_residues MRAALVAEYRKLVSTRMWWLLLIVLAGYLVFIGVVMAASFVFAPEDGSDAAPLEGVAAARAIYGLTNAVGYVFPLVIGSL AITTEFRHQTITETLLVEPRRGVLLVAKLLATIPIGLLYGVVGTLAVVGASAPLLAGWGDGAFLGDRSVLAVLALGVVVT VLWAMIGTAFGSVVPNQVAAIVVILAFTQFVEPIARLALGAFDGTDAIARFLPGAAADGLIGSSLFGELGGSGELLSRPV ALVVLVAYAGGLALLGRFTTLRRDVV >Mature_266_residues MRAALVAEYRKLVSTRMWWLLLIVLAGYLVFIGVVMAASFVFAPEDGSDAAPLEGVAAARAIYGLTNAVGYVFPLVIGSL AITTEFRHQTITETLLVEPRRGVLLVAKLLATIPIGLLYGVVGTLAVVGASAPLLAGWGDGAFLGDRSVLAVLALGVVVT VLWAMIGTAFGSVVPNQVAAIVVILAFTQFVEPIARLALGAFDGTDAIARFLPGAAADGLIGSSLFGELGGSGELLSRPV ALVVLVAYAGGLALLGRFTTLRRDVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27490; Mature: 27490
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAALVAEYRKLVSTRMWWLLLIVLAGYLVFIGVVMAASFVFAPEDGSDAAPLEGVAAAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AIYGLTNAVGYVFPLVIGSLAITTEFRHQTITETLLVEPRRGVLLVAKLLATIPIGLLYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VVGTLAVVGASAPLLAGWGDGAFLGDRSVLAVLALGVVVTVLWAMIGTAFGSVVPNQVAA HHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH IVVILAFTQFVEPIARLALGAFDGTDAIARFLPGAAADGLIGSSLFGELGGSGELLSRPV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH ALVVLVAYAGGLALLGRFTTLRRDVV HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRAALVAEYRKLVSTRMWWLLLIVLAGYLVFIGVVMAASFVFAPEDGSDAAPLEGVAAAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AIYGLTNAVGYVFPLVIGSLAITTEFRHQTITETLLVEPRRGVLLVAKLLATIPIGLLYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VVGTLAVVGASAPLLAGWGDGAFLGDRSVLAVLALGVVVTVLWAMIGTAFGSVVPNQVAA HHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH IVVILAFTQFVEPIARLALGAFDGTDAIARFLPGAAADGLIGSSLFGELGGSGELLSRPV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH ALVVLVAYAGGLALLGRFTTLRRDVV HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA