| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715139
Identifier: 119715139
GI number: 119715139
Start: 934127
End: 934765
Strand: Direct
Name: 119715139
Synonym: Noca_0894
Alternate gene names: NA
Gene position: 934127-934765 (Clockwise)
Preceding gene: 119715138
Following gene: 119715141
Centisome position: 18.74
GC content: 76.37
Gene sequence:
>639_bases ATGACCCGGCTCCGGATCGCGCAGCTGCTGGCCGTCGTGGCCACGCTCGCCGTGCTGGGCACGACCGCGGTGGCGCTGGT CGCCTGGGCCGACGGTGGTCATCACGGTCCGGGCGACGCACCCGGTGACAGGGCCGGTGGCGACCAACCGGCTGGCGACC AGCCGGCCGCAGCGGTCGTGCGCGATCCGCGCACCGGTGCGACGTTCGAGGTGCCCCGGGACCGCTGGCGGGTCCGCGAC CGGTCGGTGCGCGTCTACTACGAGGACGACGCGGGTCACCCGGTGGCCGTGGTGCGCGGACCGGCGGTGTTCCGGTCCGG CTACTGCGCCGACCGGTCCCAGGCCTCCAGCCGGGCGTTCGCAGGCTTCACGCAGCAGGACTTCCGCGCCTGGGCCGGGG CGATCGGCCACGTGGACGGCCGGACCGCCAGCCGGATCGAGCTGGCCGACGGGACCGCGGCGCGGCTGCTGTCGGCGCGC GTCACCCCGGCGGTCTCCGGGCCCTGTGGCGCGCCTCAGGTGTACGTCGCGATGGTGCGTGCCGGCGAGGTCCGGGTGGT CCTCGTGGCCGACGCCGGCGCGCCGGGAACGCTGCCCGCGGAGCGGGTCGAGGCGATCGTCGCGAGCCTGCTGCTATAG
Upstream 100 bases:
>100_bases AGATGCGCCGACTCGAGGCTGCTGGGCGGGCAAGATGCGCCGACTCGGCAGGGCGCCGGCGGCGGGTGTCGGCGGGGCGC TGGGCGGGTAGACCGCACCC
Downstream 100 bases:
>100_bases CTTGCGCAGGCGGACGTAGCGGACCGAGTGGTCCCGGTCCTTGCGCAGCACCAGCGTGGCGCGCGAGCGGGTGGGCAGCA CGTTCTGGGCCAGGTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVVRDPRTGATFEVPRDRWRVRD RSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAFAGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSAR VTPAVSGPCGAPQVYVAMVRAGEVRVVLVADAGAPGTLPAERVEAIVASLLL
Sequences:
>Translated_212_residues MTRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVVRDPRTGATFEVPRDRWRVRD RSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAFAGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSAR VTPAVSGPCGAPQVYVAMVRAGEVRVVLVADAGAPGTLPAERVEAIVASLLL >Mature_211_residues TRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVVRDPRTGATFEVPRDRWRVRDR SVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAFAGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSARV TPAVSGPCGAPQVYVAMVRAGEVRVVLVADAGAPGTLPAERVEAIVASLLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22000; Mature: 21869
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVV CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE RDPRTGATFEVPRDRWRVRDRSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAF ECCCCCCEEECCHHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHCCHHH AGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSARVTPAVSGPCGAPQVYVAMVR CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHEEEE AGEVRVVLVADAGAPGTLPAERVEAIVASLLL CCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVV CHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE RDPRTGATFEVPRDRWRVRDRSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAF ECCCCCCEEECCHHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHCCHHH AGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSARVTPAVSGPCGAPQVYVAMVR CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHEEEE AGEVRVVLVADAGAPGTLPAERVEAIVASLLL CCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA