Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715139

Identifier: 119715139

GI number: 119715139

Start: 934127

End: 934765

Strand: Direct

Name: 119715139

Synonym: Noca_0894

Alternate gene names: NA

Gene position: 934127-934765 (Clockwise)

Preceding gene: 119715138

Following gene: 119715141

Centisome position: 18.74

GC content: 76.37

Gene sequence:

>639_bases
ATGACCCGGCTCCGGATCGCGCAGCTGCTGGCCGTCGTGGCCACGCTCGCCGTGCTGGGCACGACCGCGGTGGCGCTGGT
CGCCTGGGCCGACGGTGGTCATCACGGTCCGGGCGACGCACCCGGTGACAGGGCCGGTGGCGACCAACCGGCTGGCGACC
AGCCGGCCGCAGCGGTCGTGCGCGATCCGCGCACCGGTGCGACGTTCGAGGTGCCCCGGGACCGCTGGCGGGTCCGCGAC
CGGTCGGTGCGCGTCTACTACGAGGACGACGCGGGTCACCCGGTGGCCGTGGTGCGCGGACCGGCGGTGTTCCGGTCCGG
CTACTGCGCCGACCGGTCCCAGGCCTCCAGCCGGGCGTTCGCAGGCTTCACGCAGCAGGACTTCCGCGCCTGGGCCGGGG
CGATCGGCCACGTGGACGGCCGGACCGCCAGCCGGATCGAGCTGGCCGACGGGACCGCGGCGCGGCTGCTGTCGGCGCGC
GTCACCCCGGCGGTCTCCGGGCCCTGTGGCGCGCCTCAGGTGTACGTCGCGATGGTGCGTGCCGGCGAGGTCCGGGTGGT
CCTCGTGGCCGACGCCGGCGCGCCGGGAACGCTGCCCGCGGAGCGGGTCGAGGCGATCGTCGCGAGCCTGCTGCTATAG

Upstream 100 bases:

>100_bases
AGATGCGCCGACTCGAGGCTGCTGGGCGGGCAAGATGCGCCGACTCGGCAGGGCGCCGGCGGCGGGTGTCGGCGGGGCGC
TGGGCGGGTAGACCGCACCC

Downstream 100 bases:

>100_bases
CTTGCGCAGGCGGACGTAGCGGACCGAGTGGTCCCGGTCCTTGCGCAGCACCAGCGTGGCGCGCGAGCGGGTGGGCAGCA
CGTTCTGGGCCAGGTTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVVRDPRTGATFEVPRDRWRVRD
RSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAFAGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSAR
VTPAVSGPCGAPQVYVAMVRAGEVRVVLVADAGAPGTLPAERVEAIVASLLL

Sequences:

>Translated_212_residues
MTRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVVRDPRTGATFEVPRDRWRVRD
RSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAFAGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSAR
VTPAVSGPCGAPQVYVAMVRAGEVRVVLVADAGAPGTLPAERVEAIVASLLL
>Mature_211_residues
TRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVVRDPRTGATFEVPRDRWRVRDR
SVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAFAGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSARV
TPAVSGPCGAPQVYVAMVRAGEVRVVLVADAGAPGTLPAERVEAIVASLLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22000; Mature: 21869

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVV
CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
RDPRTGATFEVPRDRWRVRDRSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAF
ECCCCCCEEECCHHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHCCHHH
AGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSARVTPAVSGPCGAPQVYVAMVR
CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHEEEE
AGEVRVVLVADAGAPGTLPAERVEAIVASLLL
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLRIAQLLAVVATLAVLGTTAVALVAWADGGHHGPGDAPGDRAGGDQPAGDQPAAAVV
CHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
RDPRTGATFEVPRDRWRVRDRSVRVYYEDDAGHPVAVVRGPAVFRSGYCADRSQASSRAF
ECCCCCCEEECCHHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHCCHHH
AGFTQQDFRAWAGAIGHVDGRTASRIELADGTAARLLSARVTPAVSGPCGAPQVYVAMVR
CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHEEEE
AGEVRVVLVADAGAPGTLPAERVEAIVASLLL
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA