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The map label for this gene is kstR2 [H]

Identifier: 119715056

GI number: 119715056

Start: 853126

End: 853728

Strand: Reverse

Name: kstR2 [H]

Synonym: Noca_0809

Alternate gene names: 119715056

Gene position: 853728-853126 (Counterclockwise)

Preceding gene: 119715058

Following gene: 119715043

Centisome position: 17.12

GC content: 67.66

Gene sequence:

>603_bases
GTGGCACGCTCCGCCCAGGTCGCCGAGGTCCCCCGAAGGGAAGCGATCATCACCGAGGCGACCCGCCTCTTCGCCGAGCA
CGGCTACCACGCCGTCGGCATGCGGTCGATCGCCGATGCCGTGGGGATCCAGAGCTCGAGCCTGTACCACCATTTCCCGT
CCAAGCAGCACCTGCTCGCCGCGATCGCCGCCGAGGGCAACCACGCCTTCATCGCCGCCCACGTGCCCATCCTCGAAGGC
GACGGTTCCCCCCGTGAGCGGCTCGAGCGAGTGCTGCGAGCGATGATCATCTACTACTGGGAGCACCGGCTCGAGCGCCA
GGTCGGACTGCGCGACTCGCGGGAGCTCGCCAACACCATCCCCGACGTGTACGAGATGATCCAGCAGGACCTCCGTCGAT
TCCAGCGCGGCGTCGAGAACGTCCTCAACGAGGGCGCCGCGGCCGGCGAGTTCGCCCTCACCGACGCGAAGCTCGACTCG
CGCGCGATCATCGGCATGTGCCTGTCCATCAACGACTGGTTCCGACCCGGCGGCTCGGCGACCATCGAACGAGTGGCGGA
TCACTACAGCGCTCTCGTCGTGGACCGGTTGCTCAAACCGTGA

Upstream 100 bases:

>100_bases
GGCCGTGACCCCGAGGCCGAGCCGCAGAAGATCACCGGTCATGAGAGTATCCTTCCGAACGTTCGACAGTCTGCCAGGCT
TGCCGGGAAGGAAAGGTCAC

Downstream 100 bases:

>100_bases
TCTCGTCGTACCCCTCGGCCCTGCCTTCCTCCGCCTGACGGTGCTCGCTGAGCTCGCGCAGTCGAGCCTTGCGCGCCCGT
GCGGCACGCAGCCGCGACAT

Product: regulatory protein TetR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MARSAQVAEVPRREAIITEATRLFAEHGYHAVGMRSIADAVGIQSSSLYHHFPSKQHLLAAIAAEGNHAFIAAHVPILEG
DGSPRERLERVLRAMIIYYWEHRLERQVGLRDSRELANTIPDVYEMIQQDLRRFQRGVENVLNEGAAAGEFALTDAKLDS
RAIIGMCLSINDWFRPGGSATIERVADHYSALVVDRLLKP

Sequences:

>Translated_200_residues
MARSAQVAEVPRREAIITEATRLFAEHGYHAVGMRSIADAVGIQSSSLYHHFPSKQHLLAAIAAEGNHAFIAAHVPILEG
DGSPRERLERVLRAMIIYYWEHRLERQVGLRDSRELANTIPDVYEMIQQDLRRFQRGVENVLNEGAAAGEFALTDAKLDS
RAIIGMCLSINDWFRPGGSATIERVADHYSALVVDRLLKP
>Mature_199_residues
ARSAQVAEVPRREAIITEATRLFAEHGYHAVGMRSIADAVGIQSSSLYHHFPSKQHLLAAIAAEGNHAFIAAHVPILEGD
GSPRERLERVLRAMIIYYWEHRLERQVGLRDSRELANTIPDVYEMIQQDLRRFQRGVENVLNEGAAAGEFALTDAKLDSR
AIIGMCLSINDWFRPGGSATIERVADHYSALVVDRLLKP

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22353; Mature: 22222

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSAQVAEVPRREAIITEATRLFAEHGYHAVGMRSIADAVGIQSSSLYHHFPSKQHLLA
CCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH
AIAAEGNHAFIAAHVPILEGDGSPRERLERVLRAMIIYYWEHRLERQVGLRDSRELANTI
HHCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PDVYEMIQQDLRRFQRGVENVLNEGAAAGEFALTDAKLDSRAIIGMCLSINDWFRPGGSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCH
TIERVADHYSALVVDRLLKP
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARSAQVAEVPRREAIITEATRLFAEHGYHAVGMRSIADAVGIQSSSLYHHFPSKQHLLA
CCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH
AIAAEGNHAFIAAHVPILEGDGSPRERLERVLRAMIIYYWEHRLERQVGLRDSRELANTI
HHCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PDVYEMIQQDLRRFQRGVENVLNEGAAAGEFALTDAKLDSRAIIGMCLSINDWFRPGGSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCH
TIERVADHYSALVVDRLLKP
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA