Click here to switch to the map view.

The map label for this gene is flgD [C]

Identifier: 119714999

GI number: 119714999

Start: 798592

End: 799083

Strand: Reverse

Name: flgD [C]

Synonym: Noca_0752

Alternate gene names: 119714999

Gene position: 799083-798592 (Counterclockwise)

Preceding gene: 119715000

Following gene: 119714998

Centisome position: 16.03

GC content: 70.93

Gene sequence:

>492_bases
GTGTCCGTTTCGGCAACCGAGGCCGTCACCCCCAGCACCGGGATGTACCAGCCGTCGACCGCCACCAGTGCGAGCGACGA
CAAGGAGATGTTCCTGAACCTGATGGTCGCCCAGCTGCGCTACCACGACCCGATGAACCCTGCGGACTCCGGCGAGTTCC
TCGCCCAGAACGCCCAGTTCACCGCCCTGGAGAAGATGCAGGACGTGGCCGACCAGACCGCCGCCCTCCTCGCCACCCAG
ATCTCGTTCGGCGCCAGCGGGCTCGTGGGCCGGTACGTCACCTACCTGGACCAGGACGGCGCCGCGGTGTCCGGCCTGGT
CGGTTCGGTGACCTACGACGCCAACGGCCCGATGCTCGTCGTCGACGGCCAGAACGTCACCCTCGGCCAGGTCCAGGCGG
TCAACGCCTCGGCCCCCGGCACCGACCCGACCACGGGCGGCGCGGCCACCGACCCGACCACCGGCGGCTCGGCCCCCGCC
ACCAACGCCTGA

Upstream 100 bases:

>100_bases
GCCACGGACGGCATCCCCGACGCGACGACCCCGTCGCGTCGCCCTGCGACGGTCACGGGGGCCCGCTCGGGCCTCGACGT
GACGATGTGAGGAGGTACCC

Downstream 100 bases:

>100_bases
CCCCCCACCCACCACCAGGAGACACCCATGCTTCGCTCCCTCTTCGCCGGCATCAGCGGCCTGCGCGTCAACCAGACCAT
GCTCGACGTCACCGGCAACA

Product: flagellar hook capping protein

Products: NA

Alternate protein names: Flagellar Hook Assembly Protein; Flagellar Hook Capping Protein-Like Protein; Flagellar Basal Body Rod Protein

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSVSATEAVTPSTGMYQPSTATSASDDKEMFLNLMVAQLRYHDPMNPADSGEFLAQNAQFTALEKMQDVADQTAALLATQ
ISFGASGLVGRYVTYLDQDGAAVSGLVGSVTYDANGPMLVVDGQNVTLGQVQAVNASAPGTDPTTGGAATDPTTGGSAPA
TNA

Sequences:

>Translated_163_residues
MSVSATEAVTPSTGMYQPSTATSASDDKEMFLNLMVAQLRYHDPMNPADSGEFLAQNAQFTALEKMQDVADQTAALLATQ
ISFGASGLVGRYVTYLDQDGAAVSGLVGSVTYDANGPMLVVDGQNVTLGQVQAVNASAPGTDPTTGGAATDPTTGGSAPA
TNA
>Mature_162_residues
SVSATEAVTPSTGMYQPSTATSASDDKEMFLNLMVAQLRYHDPMNPADSGEFLAQNAQFTALEKMQDVADQTAALLATQI
SFGASGLVGRYVTYLDQDGAAVSGLVGSVTYDANGPMLVVDGQNVTLGQVQAVNASAPGTDPTTGGAATDPTTGGSAPAT
NA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16527; Mature: 16396

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSATEAVTPSTGMYQPSTATSASDDKEMFLNLMVAQLRYHDPMNPADSGEFLAQNAQF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCH
TALEKMQDVADQTAALLATQISFGASGLVGRYVTYLDQDGAAVSGLVGSVTYDANGPMLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHEEEEEECCCCCEEE
VDGQNVTLGQVQAVNASAPGTDPTTGGAATDPTTGGSAPATNA
ECCCCCEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVSATEAVTPSTGMYQPSTATSASDDKEMFLNLMVAQLRYHDPMNPADSGEFLAQNAQF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCH
TALEKMQDVADQTAALLATQISFGASGLVGRYVTYLDQDGAAVSGLVGSVTYDANGPMLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHEEEEEECCCCCEEE
VDGQNVTLGQVQAVNASAPGTDPTTGGAATDPTTGGSAPATNA
ECCCCCEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA