| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is flgG [H]
Identifier: 119714998
GI number: 119714998
Start: 797716
End: 798564
Strand: Reverse
Name: flgG [H]
Synonym: Noca_0751
Alternate gene names: 119714998
Gene position: 798564-797716 (Counterclockwise)
Preceding gene: 119714999
Following gene: 119714997
Centisome position: 16.02
GC content: 69.14
Gene sequence:
>849_bases ATGCTTCGCTCCCTCTTCGCCGGCATCAGCGGCCTGCGCGTCAACCAGACCATGCTCGACGTCACCGGCAACAACATCGC CAACGCCAACACCATCGGCTTCAAGTCCAGCTCGACGGTCTTCCAGGACACCCTCTCCCAGATGCTGACCTCCGGATCCG CGGCCGGGGGCGGCCTGGGCGGCACCAACCCGATCCAGGTCGGGCTCGGCGTCCAGGTGGCGGCGACCAACACCAACCTC AACCAGGGCGCGAACCAGACCACCGGACGGCCCACCGACCTGATGATCAACGGCGACGGCATGTTCGTGGTCATGCGCGG CAACGTGGCCACCTACACCCGCGCCGGCGCCTTCAGCTGGGACAACAGCGGCACCCTCGTCTCGCCGGGCGGCGGGCGGG TCCAGGGCTACACCACGTTCGACGCGGCCGGGGTGCACACGGGAGGGCTCACCGACATCGTGCTGCCCGAGGACAACGGG GCGACGCCGCCGTTGGCGCTCTCGTCGTACGAGCTCGGCCGGGACGGCAAGCTCACGGCGACCTTCGAGGACGGCAGCAA GCTCGTCGTCGCCCAGGTCGCTCTCGCCAACTTCAACAACCCGATGGGTCTGGCCCGGGCCGGGGAGACCAGCTTCACCA CCACGGCCAACTCCGGGGTGGCCGAGCTCGGCGTCTCCGGAGAGGGCAGCCGCGGCGCGTTGAGCCCCGGCTCCGTGGAG ATGTCGAACGTCGACCTGGCCGCCGAGTTCACCAACCTGATCCTCGCCCAGCGCGGCTTCCAGGCGAGCTCGCGGGTGAT CACGACCTCCGACCAGGTCCTCGAGGACCTCGTCAACATCAAGCGGTAG
Upstream 100 bases:
>100_bases CACCGACCCGACCACGGGCGGCGCGGCCACCGACCCGACCACCGGCGGCTCGGCCCCCGCCACCAACGCCTGACCCCCCA CCCACCACCAGGAGACACCC
Downstream 100 bases:
>100_bases CCCTCGGCGGTGCGCCCGGACCGCTCAGGTCCGGGCGCCCGACGCCGATGGAAACACTGCGAGCGCCACGGACGGCTGCT CGGAACGGCCCAAGGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLGGTNPIQVGLGVQVAATNTNL NQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSWDNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNG ATPPLALSSYELGRDGKLTATFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVNIKR
Sequences:
>Translated_282_residues MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLGGTNPIQVGLGVQVAATNTNL NQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSWDNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNG ATPPLALSSYELGRDGKLTATFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVNIKR >Mature_282_residues MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLGGTNPIQVGLGVQVAATNTNL NQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSWDNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNG ATPPLALSSYELGRDGKLTATFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVNIKR
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=283, Percent_Identity=33.2155477031802, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1787316, Length=133, Percent_Identity=40.6015037593985, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 28847; Mature: 28847
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLG CCHHHHCCCCCCEECEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCC GTNPIQVGLGVQVAATNTNLNQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSW CCCCEEEECCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEEEEECCCEEE DNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNGATPPLALSSYELGRDGKLTA CCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEE TFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE EECCCCEEEEEEEEECCCCCCCCEEECCCCCEEEECCCCCEEECCCCCCCCCCCCCCCEE MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVNIKR ECCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCC >Mature Secondary Structure MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLG CCHHHHCCCCCCEECEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCC GTNPIQVGLGVQVAATNTNLNQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSW CCCCEEEECCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEEEEECCCEEE DNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNGATPPLALSSYELGRDGKLTA CCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEE TFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE EECCCCEEEEEEEEECCCCCCCCEEECCCCCEEEECCCCCEEECCCCCCCCCCCCCCCEE MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVNIKR ECCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1828465; 1905667; 9384377 [H]