| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715000
Identifier: 119715000
GI number: 119715000
Start: 799094
End: 800419
Strand: Reverse
Name: 119715000
Synonym: Noca_0753
Alternate gene names: NA
Gene position: 800419-799094 (Counterclockwise)
Preceding gene: 119715001
Following gene: 119714999
Centisome position: 16.05
GC content: 78.13
Gene sequence:
>1326_bases ATGACCACCACCCCGATCGGCCCGCCGCCCGTAGCTGTCGCCGACCCGAACATCCCCGGTGCACCCGGGTCCACCGCCGA CGGCACGACCGGGGACGCCTTCCTCGCCCTGGTCCAGGCCCTCCTCGACGCGGGCCCTGTGCCACAGCCGGTCGGAGCGA GCACCGCTGCCGGCGGTCACGGGACGCCCGCCGACGCCGCCGACGACGCGTCGGCCTCGGAGCCCACCGACGAGACGGCC GCAGCGATCGACCCGGACCTGGTGCCGGGCCTCGCCCCGAACCTGGTCCCAGTGATCGTGGCCGGTCTGACGATCCCGGT CCCCATCACCGTTGCCCGATCGTCGTCCGGGCCAGCCTCGGGGCCGACGGTGGCTGCGGCGGATGCGATCACGGGCGTGG GAGCCGAGAGCAGCACGTCGGCCCTCCCCGTCGCCTCCCCCGGGGCCGGTCCGGCGGCCACCGCTCCGGCGGCCACCGCT CCGGCGACCACCGCTCCGGCGACCACCGCTCCGGCCGCCACCGCTCCGGCCGCCCCGGCTCCGGCTCGATCGCTGCCGGC CGAGCCGCCGGTCTCCGCTCTGCCGGGCGACCCGGCCGCGGACGCGCCGCTCGCCGAGCCGGGCGCTCTCGCCGCCCGCG CGGACCGAGGCACGAGCGACACCGGTCCGCGCACGCAGTCGACCGCGGGCGTCAACCCGACCGCCGCGACCGCCACCCCG CTGGCCGCGGCCTCTGCGCCGGTGGCCGCGACCTCCGCGCCGGCGGGAGCACCCGCCAGCACCGCGTCGAGCGCCGTCGC CCACCAGGTCTTCCCGGAGGTCGTCCGGCTGACCACGAGCAGTGACGGCCCCCAGCGGGTCACCATCCGGCTGAACCCCG AGTCGCTCGGCGAGGTCCGTGTGGTGCTCACCCAGCGGCAGGGCGGCCTCGAGGTCAGCCTCAGCGCCGGCACCGAGGCC CGCCGGGCGCTGGCGGACGGCACCCCCGAGCTGCAGCGGCTGCTGGACGCGGTCGGACGCAGCGACGCCCGGATCGTGGT CCGCGACGGAACCGGCCTGCCGGTGGCCTCGTCGGCGCCTTCGGCCGGCACCTCGGGCCAGGCCGGCACCCAGCAGCCGG GCGCCGGGTCGCAGTGGTCCACCGATCTCTCCGGCGGCGCCTGGACCGGCGCCGACCGCAACGGTGGCGAGGCCACCGGC GGCCACGGCCGGAGCACCAGGCCAGGAAGCAGCAACGCCACGGACGGCATCCCCGACGCGACGACCCCGTCGCGTCGCCC TGCGACGGTCACGGGGGCCCGCTCGGGCCTCGACGTGACGATGTGA
Upstream 100 bases:
>100_bases ACGCCGGCCCGGGGGCCGTGCTCCGGTACGGCGGGGTCCCGCCCTACCCCGAGACCAAGAACTACGTCCGTTCCGTGATG TCGATGCTGGGAGCCGCCGC
Downstream 100 bases:
>100_bases GGAGGTACCCGTGTCCGTTTCGGCAACCGAGGCCGTCACCCCCAGCACCGGGATGTACCAGCCGTCGACCGCCACCAGTG CGAGCGACGACAAGGAGATG
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTTTPIGPPPVAVADPNIPGAPGSTADGTTGDAFLALVQALLDAGPVPQPVGASTAAGGHGTPADAADDASASEPTDETA AAIDPDLVPGLAPNLVPVIVAGLTIPVPITVARSSSGPASGPTVAAADAITGVGAESSTSALPVASPGAGPAATAPAATA PATTAPATTAPAATAPAAPAPARSLPAEPPVSALPGDPAADAPLAEPGALAARADRGTSDTGPRTQSTAGVNPTAATATP LAAASAPVAATSAPAGAPASTASSAVAHQVFPEVVRLTTSSDGPQRVTIRLNPESLGEVRVVLTQRQGGLEVSLSAGTEA RRALADGTPELQRLLDAVGRSDARIVVRDGTGLPVASSAPSAGTSGQAGTQQPGAGSQWSTDLSGGAWTGADRNGGEATG GHGRSTRPGSSNATDGIPDATTPSRRPATVTGARSGLDVTM
Sequences:
>Translated_441_residues MTTTPIGPPPVAVADPNIPGAPGSTADGTTGDAFLALVQALLDAGPVPQPVGASTAAGGHGTPADAADDASASEPTDETA AAIDPDLVPGLAPNLVPVIVAGLTIPVPITVARSSSGPASGPTVAAADAITGVGAESSTSALPVASPGAGPAATAPAATA PATTAPATTAPAATAPAAPAPARSLPAEPPVSALPGDPAADAPLAEPGALAARADRGTSDTGPRTQSTAGVNPTAATATP LAAASAPVAATSAPAGAPASTASSAVAHQVFPEVVRLTTSSDGPQRVTIRLNPESLGEVRVVLTQRQGGLEVSLSAGTEA RRALADGTPELQRLLDAVGRSDARIVVRDGTGLPVASSAPSAGTSGQAGTQQPGAGSQWSTDLSGGAWTGADRNGGEATG GHGRSTRPGSSNATDGIPDATTPSRRPATVTGARSGLDVTM >Mature_440_residues TTTPIGPPPVAVADPNIPGAPGSTADGTTGDAFLALVQALLDAGPVPQPVGASTAAGGHGTPADAADDASASEPTDETAA AIDPDLVPGLAPNLVPVIVAGLTIPVPITVARSSSGPASGPTVAAADAITGVGAESSTSALPVASPGAGPAATAPAATAP ATTAPATTAPAATAPAAPAPARSLPAEPPVSALPGDPAADAPLAEPGALAARADRGTSDTGPRTQSTAGVNPTAATATPL AAASAPVAATSAPAGAPASTASSAVAHQVFPEVVRLTTSSDGPQRVTIRLNPESLGEVRVVLTQRQGGLEVSLSAGTEAR RALADGTPELQRLLDAVGRSDARIVVRDGTGLPVASSAPSAGTSGQAGTQQPGAGSQWSTDLSGGAWTGADRNGGEATGG HGRSTRPGSSNATDGIPDATTPSRRPATVTGARSGLDVTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41961; Mature: 41830
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPIGPPPVAVADPNIPGAPGSTADGTTGDAFLALVQALLDAGPVPQPVGASTAAGGH CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GTPADAADDASASEPTDETAAAIDPDLVPGLAPNLVPVIVAGLTIPVPITVARSSSGPAS CCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC GPTVAAADAITGVGAESSTSALPVASPGAGPAATAPAATAPATTAPATTAPAATAPAAPA CCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PARSLPAEPPVSALPGDPAADAPLAEPGALAARADRGTSDTGPRTQSTAGVNPTAATATP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHECCCCCCCCCCCCCCCCCCCCCCCCCCCC LAAASAPVAATSAPAGAPASTASSAVAHQVFPEVVRLTTSSDGPQRVTIRLNPESLGEVR HHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEE VVLTQRQGGLEVSLSAGTEARRALADGTPELQRLLDAVGRSDARIVVRDGTGLPVASSAP EEEEECCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC SAGTSGQAGTQQPGAGSQWSTDLSGGAWTGADRNGGEATGGHGRSTRPGSSNATDGIPDA CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTPSRRPATVTGARSGLDVTM CCCCCCCCEEECCCCCCEECC >Mature Secondary Structure TTTPIGPPPVAVADPNIPGAPGSTADGTTGDAFLALVQALLDAGPVPQPVGASTAAGGH CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GTPADAADDASASEPTDETAAAIDPDLVPGLAPNLVPVIVAGLTIPVPITVARSSSGPAS CCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC GPTVAAADAITGVGAESSTSALPVASPGAGPAATAPAATAPATTAPATTAPAATAPAAPA CCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PARSLPAEPPVSALPGDPAADAPLAEPGALAARADRGTSDTGPRTQSTAGVNPTAATATP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHECCCCCCCCCCCCCCCCCCCCCCCCCCCC LAAASAPVAATSAPAGAPASTASSAVAHQVFPEVVRLTTSSDGPQRVTIRLNPESLGEVR HHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEE VVLTQRQGGLEVSLSAGTEARRALADGTPELQRLLDAVGRSDARIVVRDGTGLPVASSAP EEEEECCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC SAGTSGQAGTQQPGAGSQWSTDLSGGAWTGADRNGGEATGGHGRSTRPGSSNATDGIPDA CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTPSRRPATVTGARSGLDVTM CCCCCCCCEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA