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The map label for this gene is 119386544

Identifier: 119386544

GI number: 119386544

Start: 972058

End: 972303

Strand: Direct

Name: 119386544

Synonym: Pden_3837

Alternate gene names: NA

Gene position: 972058-972303 (Clockwise)

Preceding gene: 119386541

Following gene: 119386545

Centisome position: 56.19

GC content: 60.16

Gene sequence:

>246_bases
ATGGGCCGAACCCTGCGCAGCCCTGGTCATCTGGCCTTGATGGCTGCCCTCAAGCAGGCTCGCCTGGATGCAGGGCTGAC
GCAGACCGAGCTGGCAGAGCGCCTGAAGCGGCCGCAGTCTTTCGTGGCGAAATACGAGAATGGTGAGCGGCGGATCGAGG
TTGTGGAATTGATCGAGATCGCTGATGCGATAGGGGCAGACCCTCATGATATCATTCAGATCGTGCGAGATGCTGAGGGA
CGCTGA

Upstream 100 bases:

>100_bases
CTGAAAATAAAGATGCAAACACGTCCGGCACGGAATAACCCAAAATGGGATAACGCTCAAGTGCCACTATCCGAATTCCG
GATTTATCTGGAGTTCAAGG

Downstream 100 bases:

>100_bases
TACAGGCGCGCAGATGTTAGATGTGGTCTGCATCAGGGCGGGGGCAGGCTATGGGCGGAGACCGGACTCGCGGCGGGGCA
GCATCGCGCTTCCAGAAATC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MGRTLRSPGHLALMAALKQARLDAGLTQTELAERLKRPQSFVAKYENGERRIEVVELIEIADAIGADPHDIIQIVRDAEG
R

Sequences:

>Translated_81_residues
MGRTLRSPGHLALMAALKQARLDAGLTQTELAERLKRPQSFVAKYENGERRIEVVELIEIADAIGADPHDIIQIVRDAEG
R
>Mature_80_residues
GRTLRSPGHLALMAALKQARLDAGLTQTELAERLKRPQSFVAKYENGERRIEVVELIEIADAIGADPHDIIQIVRDAEGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8990; Mature: 8859

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTLRSPGHLALMAALKQARLDAGLTQTELAERLKRPQSFVAKYENGERRIEVVELIEI
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHH
ADAIGADPHDIIQIVRDAEGR
HHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRTLRSPGHLALMAALKQARLDAGLTQTELAERLKRPQSFVAKYENGERRIEVVELIEI
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHH
ADAIGADPHDIIQIVRDAEGR
HHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA