| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386536
Identifier: 119386536
GI number: 119386536
Start: 966002
End: 967363
Strand: Direct
Name: 119386536
Synonym: Pden_3829
Alternate gene names: NA
Gene position: 966002-967363 (Clockwise)
Preceding gene: 119386535
Following gene: 119386537
Centisome position: 55.84
GC content: 66.59
Gene sequence:
>1362_bases ATGTCTGACCGCTTCGGGAAATCCATCTTCGCGCACAAGCAGACCTATTCGCGCAAGGGCAACAGCAAGAGCCGGTCGGT CCGAGAGATCGCAGACGAGGCGGAGCGGCTTGACGGGGCCTGCCCGCATGTCGAGAACCCGCAGCCGCCCACTATCCTCG AAGGCATCCAGCCCTCGGAGGTGGTCGCGCTGATCGAGCAGCGTATTGCTGAACAGAACAAGCTACTGCGTCAACTGCGC AAGGAGCAGCCGGATCGCAAGGACGCCGCGCGGGGCATCCGCAGCGACACGCATGTGCTGATCGCCAGCGTCTTCAGCTT TCCGGATCCGGTCGAGGACATGAACGAGGCCGATTACCTGCGCTGGCGCAAGGACGTGATCGCCTTCGCTAAGGACGATG CAGCGCGCAACGCGGCCGAGGTGCTGAGCATCGTCGAGCATCTCGATGAAGCCCACCCGCATGTGCATGTGCTGGCGGTG CCCATATGTGCAGAGGGCAATATGCGCATGGACGCCAAGCGCTGTCATGAGGGTCACCGCGAGCAGGACCGGCACAAGGA TCACGGCTGGTCCGGCTCGCCGTCTCGCAGCTACAAGCAGGCGATGCGCGGCTGGCAGGACCGCTATCATGCCGAGGTCG GAGCGAAGCATGGGCAGGCCCGGACGGGGCCGCGCCGCCGCCGTCTGGACCGCGGGGCGTGGAAGGCCGAGCAGGAGCGG CTGAAGGCGCAGAAGGACGCCGAGATTGCCATCTTGCGCGCCGAAGAGGCCCGTCGCCTTGCCGACGAGGAAGAGCGCCG CCGCGACCTGGTCATGCAGGACACGGTCGCCAGACGGATTCGGGAGGCCGAGACGGTCCATGCCATCGCTGCCGGTGGGC TGATCGCCGCCATCCGGCAGATCGATCCCGACCCGGTGCTGCTGGAGCGGCTGGAAACGCCGGGGGAGATGGGCGCCTGG ACGCATCACGATGCAGATCGCAACCGCGAAATGCACAACGCGCTGGCGCCGGTTCTCAGCGACGGGCTGGAAGCCCTGCG CCAGCCACGGGGAGGTCCGGGGTTGCTCGGCGGTCTGTCCGGCTTCCTGCGCGGGGTTGCGGGTTGGGTCAATCGCCTCG CCGATGCCAGTCCGCGCTGGCTGAAATGGCCGGAAACCGTGGCCTATGTAGCCCATGGGGCGAAGCAGGCGTTCGGCACG ACCTACACAGCCTCGACCCTGGCCGGGGTCATCGAGGCCTCGCCAGTATGGCAATCCTTCACCGGCGAGGCAAAGACGCG GCTGGATCAGGCGCGGGCGGTGCAGGCGCTGACGAATTCGCGCGGCTCTCGACCAAACGCTTCATCGCAGAGGGGCATAT GA
Upstream 100 bases:
>100_bases TGCCGAACCCTGAGCGTCGGGCAGGTCCGCATGGCGCTGGACCTGGAGCTGGTTTCCCGCAGCGAAGTGTGCGCTGCAGG CTTCAACGAGGGCTTGCGTT
Downstream 100 bases:
>100_bases CAGCATGCGCTTGTGCCAATATGCACATCCGGCGACGGAGAGCCGGCAATTGCGGCTGATACGATTTCTTGGTAATTTCC GGTATCGACGCACAGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Mob Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSDRFGKSIFAHKQTYSRKGNSKSRSVREIADEAERLDGACPHVENPQPPTILEGIQPSEVVALIEQRIAEQNKLLRQLR KEQPDRKDAARGIRSDTHVLIASVFSFPDPVEDMNEADYLRWRKDVIAFAKDDAARNAAEVLSIVEHLDEAHPHVHVLAV PICAEGNMRMDAKRCHEGHREQDRHKDHGWSGSPSRSYKQAMRGWQDRYHAEVGAKHGQARTGPRRRRLDRGAWKAEQER LKAQKDAEIAILRAEEARRLADEEERRRDLVMQDTVARRIREAETVHAIAAGGLIAAIRQIDPDPVLLERLETPGEMGAW THHDADRNREMHNALAPVLSDGLEALRQPRGGPGLLGGLSGFLRGVAGWVNRLADASPRWLKWPETVAYVAHGAKQAFGT TYTASTLAGVIEASPVWQSFTGEAKTRLDQARAVQALTNSRGSRPNASSQRGI
Sequences:
>Translated_453_residues MSDRFGKSIFAHKQTYSRKGNSKSRSVREIADEAERLDGACPHVENPQPPTILEGIQPSEVVALIEQRIAEQNKLLRQLR KEQPDRKDAARGIRSDTHVLIASVFSFPDPVEDMNEADYLRWRKDVIAFAKDDAARNAAEVLSIVEHLDEAHPHVHVLAV PICAEGNMRMDAKRCHEGHREQDRHKDHGWSGSPSRSYKQAMRGWQDRYHAEVGAKHGQARTGPRRRRLDRGAWKAEQER LKAQKDAEIAILRAEEARRLADEEERRRDLVMQDTVARRIREAETVHAIAAGGLIAAIRQIDPDPVLLERLETPGEMGAW THHDADRNREMHNALAPVLSDGLEALRQPRGGPGLLGGLSGFLRGVAGWVNRLADASPRWLKWPETVAYVAHGAKQAFGT TYTASTLAGVIEASPVWQSFTGEAKTRLDQARAVQALTNSRGSRPNASSQRGI >Mature_452_residues SDRFGKSIFAHKQTYSRKGNSKSRSVREIADEAERLDGACPHVENPQPPTILEGIQPSEVVALIEQRIAEQNKLLRQLRK EQPDRKDAARGIRSDTHVLIASVFSFPDPVEDMNEADYLRWRKDVIAFAKDDAARNAAEVLSIVEHLDEAHPHVHVLAVP ICAEGNMRMDAKRCHEGHREQDRHKDHGWSGSPSRSYKQAMRGWQDRYHAEVGAKHGQARTGPRRRRLDRGAWKAEQERL KAQKDAEIAILRAEEARRLADEEERRRDLVMQDTVARRIREAETVHAIAAGGLIAAIRQIDPDPVLLERLETPGEMGAWT HHDADRNREMHNALAPVLSDGLEALRQPRGGPGLLGGLSGFLRGVAGWVNRLADASPRWLKWPETVAYVAHGAKQAFGTT YTASTLAGVIEASPVWQSFTGEAKTRLDQARAVQALTNSRGSRPNASSQRGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50593; Mature: 50462
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRFGKSIFAHKQTYSRKGNSKSRSVREIADEAERLDGACPHVENPQPPTILEGIQPSE CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHH VVALIEQRIAEQNKLLRQLRKEQPDRKDAARGIRSDTHVLIASVFSFPDPVEDMNEADYL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCHHHHH RWRKDVIAFAKDDAARNAAEVLSIVEHLDEAHPHVHVLAVPICAEGNMRMDAKRCHEGHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHCCHH EQDRHKDHGWSGSPSRSYKQAMRGWQDRYHAEVGAKHGQARTGPRRRRLDRGAWKAEQER HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LKAQKDAEIAILRAEEARRLADEEERRRDLVMQDTVARRIREAETVHAIAAGGLIAAIRQ HHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDPDPVLLERLETPGEMGAWTHHDADRNREMHNALAPVLSDGLEALRQPRGGPGLLGGLS CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GFLRGVAGWVNRLADASPRWLKWPETVAYVAHGAKQAFGTTYTASTLAGVIEASPVWQSF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH TGEAKTRLDQARAVQALTNSRGSRPNASSQRGI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SDRFGKSIFAHKQTYSRKGNSKSRSVREIADEAERLDGACPHVENPQPPTILEGIQPSE CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHH VVALIEQRIAEQNKLLRQLRKEQPDRKDAARGIRSDTHVLIASVFSFPDPVEDMNEADYL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCHHHHH RWRKDVIAFAKDDAARNAAEVLSIVEHLDEAHPHVHVLAVPICAEGNMRMDAKRCHEGHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHCCHH EQDRHKDHGWSGSPSRSYKQAMRGWQDRYHAEVGAKHGQARTGPRRRRLDRGAWKAEQER HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LKAQKDAEIAILRAEEARRLADEEERRRDLVMQDTVARRIREAETVHAIAAGGLIAAIRQ HHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDPDPVLLERLETPGEMGAWTHHDADRNREMHNALAPVLSDGLEALRQPRGGPGLLGGLS CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GFLRGVAGWVNRLADASPRWLKWPETVAYVAHGAKQAFGTTYTASTLAGVIEASPVWQSF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH TGEAKTRLDQARAVQALTNSRGSRPNASSQRGI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA