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The map label for this gene is 119386537

Identifier: 119386537

GI number: 119386537

Start: 967468

End: 967713

Strand: Direct

Name: 119386537

Synonym: Pden_3830

Alternate gene names: NA

Gene position: 967468-967713 (Clockwise)

Preceding gene: 119386536

Following gene: 119386538

Centisome position: 55.92

GC content: 66.26

Gene sequence:

>246_bases
ATGTCCCGCAACACTTCGGTTTCGCTCGGCGATCACTTCGTCAGCTTCATCGACGCGCAGGTGAAGGGCGGCCGCTATGG
CTCGGCCAGCGACGTGGTGCGGGCGGGGCTGCGGCTTCTGGAGGAGCACGAGGCCAAGGTAAAGGCCCTCCAGGACGCCC
TGATCGCGGGAGAGGACTCCGGCCGGGCGGAGGGCTTCGACCTCGATCAGTTCATTGCCCGCAAGATGGCCGGTCGCAAT
GCGTGA

Upstream 100 bases:

>100_bases
ATGCGCTTGTGCCAATATGCACATCCGGCGACGGAGAGCCGGCAATTGCGGCTGATACGATTTCTTGGTAATTTCCGGTA
TCGACGCACAGGAGGCCCGC

Downstream 100 bases:

>100_bases
AGGCATTGGCCTTCACCGTCGCGGCAACGGTCGATCTGGAGGATATCTGGGATTATACGGAAGGCGAATGGGGTCTGGCG
CAAGCCCGGCGGTATGCGGA

Product: CopG/Arc/MetJ family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDSGRAEGFDLDQFIARKMAGRN
A

Sequences:

>Translated_81_residues
MSRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDSGRAEGFDLDQFIARKMAGRN
A
>Mature_80_residues
SRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDSGRAEGFDLDQFIARKMAGRNA

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0156 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005360
- InterPro:   IPR010985
- InterPro:   IPR022789 [H]

Pfam domain/function: PF03693 RHH_2 [H]

EC number: NA

Molecular weight: Translated: 8709; Mature: 8578

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDS
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GRAEGFDLDQFIARKMAGRNA
CCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRNTSVSLGDHFVSFIDAQVKGGRYGSASDVVRAGLRLLEEHEAKVKALQDALIAGEDS
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GRAEGFDLDQFIARKMAGRNA
CCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]