| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386535
Identifier: 119386535
GI number: 119386535
Start: 965152
End: 966009
Strand: Direct
Name: 119386535
Synonym: Pden_3828
Alternate gene names: NA
Gene position: 965152-966009 (Clockwise)
Preceding gene: 119386530
Following gene: 119386536
Centisome position: 55.79
GC content: 61.19
Gene sequence:
>858_bases ATGAGCTGGAAGGTTGCGAATCTTTGCGCCGGGCGGCGCTTCGGCAGTCCGGTCCGAAAGCAGATCATCATGTTTCTGGC CGACAAGGCCAGCGATGACGGGTCTGGCATCTGGTGTTCCAAGGGAACGATCCAGCGGCACACCGAGCTTGGCGAAACCA CCGTCAAGCGCACGATCAACGAGTTCCTGAACGAAGGCATCCTGATCGAGACCGGCCGCCGTGCCTGCAAGAACGGTTTT ACCGTCGTCTATCGCATTTCCCTTGCCGCCGTCCGCACGCTGGAGGGCATTGCCGAACCCGATGATGAGACGGGGTCCAC AGAGGACGGGGTCTACCGTGAACCCGGAACGGGGTCCGCTGCGGACCCGGTACCCCGTCCACAGCGGACCCCAAACCATC CTGAAACCATCCATAAACCACCTTCGCGTGCGCGTGCACGCGAGGCGGCGGCGGAATCTCTGGAGATATTGAAGGCCTAT CCAATCGACCGATGTCGCGACGAAGCGACCTGCCTGCATCACGTCGAAGCTGCCATGCAGGAGGTCGGGCATGAAAAGCT TCTCTCGGCTGTAAAGCGCTATGCGCTGGAGACCGCAGGCTATACGCGCTCAAAGGTCTGTTTCTCGGATAACTGGTTCA GGACGGGCCGCTGGCGCGATTATATCGAAGACGAGCCGGAATCGCCTGAGGAACCGACCCCGGCGCATGCGGCCAAAACT GCCGACTGGATCAAATCCCGTCATCCCCTGTGCCGAACCCTGAGCGTCGGGCAGGTCCGCATGGCGCTGGACCTGGAGCT GGTTTCCCGCAGCGAAGTGTGCGCTGCAGGCTTCAACGAGGGCTTGCGTTATGTCTGA
Upstream 100 bases:
>100_bases TCGGAGGAGCTGGCACTCCATCCGACGGCACTGTCAAAGGTCTTCTGCCCAAAGATTATGTCACAGCGCCTCGCCGCGCA ACCCCATGGGGAGGTGCGGC
Downstream 100 bases:
>100_bases CCGCTTCGGGAAATCCATCTTCGCGCACAAGCAGACCTATTCGCGCAAGGGCAACAGCAAGAGCCGGTCGGTCCGAGAGA TCGCAGACGAGGCGGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSWKVANLCAGRRFGSPVRKQIIMFLADKASDDGSGIWCSKGTIQRHTELGETTVKRTINEFLNEGILIETGRRACKNGF TVVYRISLAAVRTLEGIAEPDDETGSTEDGVYREPGTGSAADPVPRPQRTPNHPETIHKPPSRARAREAAAESLEILKAY PIDRCRDEATCLHHVEAAMQEVGHEKLLSAVKRYALETAGYTRSKVCFSDNWFRTGRWRDYIEDEPESPEEPTPAHAAKT ADWIKSRHPLCRTLSVGQVRMALDLELVSRSEVCAAGFNEGLRYV
Sequences:
>Translated_285_residues MSWKVANLCAGRRFGSPVRKQIIMFLADKASDDGSGIWCSKGTIQRHTELGETTVKRTINEFLNEGILIETGRRACKNGF TVVYRISLAAVRTLEGIAEPDDETGSTEDGVYREPGTGSAADPVPRPQRTPNHPETIHKPPSRARAREAAAESLEILKAY PIDRCRDEATCLHHVEAAMQEVGHEKLLSAVKRYALETAGYTRSKVCFSDNWFRTGRWRDYIEDEPESPEEPTPAHAAKT ADWIKSRHPLCRTLSVGQVRMALDLELVSRSEVCAAGFNEGLRYV >Mature_284_residues SWKVANLCAGRRFGSPVRKQIIMFLADKASDDGSGIWCSKGTIQRHTELGETTVKRTINEFLNEGILIETGRRACKNGFT VVYRISLAAVRTLEGIAEPDDETGSTEDGVYREPGTGSAADPVPRPQRTPNHPETIHKPPSRARAREAAAESLEILKAYP IDRCRDEATCLHHVEAAMQEVGHEKLLSAVKRYALETAGYTRSKVCFSDNWFRTGRWRDYIEDEPESPEEPTPAHAAKTA DWIKSRHPLCRTLSVGQVRMALDLELVSRSEVCAAGFNEGLRYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31754; Mature: 31623
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKVANLCAGRRFGSPVRKQIIMFLADKASDDGSGIWCSKGTIQRHTELGETTVKRTIN CCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH EFLNEGILIETGRRACKNGFTVVYRISLAAVRTLEGIAEPDDETGSTEDGVYREPGTGSA HHHHCCEEEECCHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC ADPVPRPQRTPNHPETIHKPPSRARAREAAAESLEILKAYPIDRCRDEATCLHHVEAAMQ CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EVGHEKLLSAVKRYALETAGYTRSKVCFSDNWFRTGRWRDYIEDEPESPEEPTPAHAAKT HHCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCCHHHHCCCCCCCCCCCCHHHHHH ADWIKSRHPLCRTLSVGQVRMALDLELVSRSEVCAAGFNEGLRYV HHHHHHCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SWKVANLCAGRRFGSPVRKQIIMFLADKASDDGSGIWCSKGTIQRHTELGETTVKRTIN CCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH EFLNEGILIETGRRACKNGFTVVYRISLAAVRTLEGIAEPDDETGSTEDGVYREPGTGSA HHHHCCEEEECCHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC ADPVPRPQRTPNHPETIHKPPSRARAREAAAESLEILKAYPIDRCRDEATCLHHVEAAMQ CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EVGHEKLLSAVKRYALETAGYTRSKVCFSDNWFRTGRWRDYIEDEPESPEEPTPAHAAKT HHCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCCHHHHCCCCCCCCCCCCHHHHHH ADWIKSRHPLCRTLSVGQVRMALDLELVSRSEVCAAGFNEGLRYV HHHHHHCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA