| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386305
Identifier: 119386305
GI number: 119386305
Start: 747589
End: 748251
Strand: Direct
Name: 119386305
Synonym: Pden_3597
Alternate gene names: NA
Gene position: 747589-748251 (Clockwise)
Preceding gene: 119386304
Following gene: 119386306
Centisome position: 43.21
GC content: 64.25
Gene sequence:
>663_bases ATGCAGGTATCGTTTCCGTTCCCGGTCAAGCTGCAATCCTCGGTGCCGAAGCTTGAGGGGCTGCGCTTCCAGCCCTTTAC GAACATCGACAGCGAGACCTTCGCCAAGCCGGCGCTGAATGGCTTCTGGCGGCTGGACATGACGGTGCTGGCCCATGACA TGCAGTCGCATCTGGCCCTGTCGTCGTTCGTGACCCAGATGAGCGCGGCCGGCACCACCTGCGTTGTCCCGGTCTGCACG CAATGGCGCCCGAACGACCAGAACGGCCGGCGGCTGACCGGCTGCGACATGGCTCCGGCCTATACCTTCGATCATGTCGG CTTCCTCGGCGAGCCCTTCGACGGCTTCACCCTGCGCGCGGCAGCGGCTCACCGGGCCAGCTATATCGACATCGACAAGC CGGCCATGTCGCAACTGTGGCCGGGCCATTTCATCAGCCTGGGCGACCGGCTGCACCAGGTGGTCAACACTACCTCAATC GGGGAGAGCGAGACGGCGATCCGAGTTTCGATCATGCCGAACATCCGCGAAGCGCAGCCATCCGGGACGGTGGTGATCGT GGATCAGCTACGGCTCAAGGTGATGATGGAGTCCGGCGACCAGATCGGCCTCGGGACGGGGCGTTTCCGTTCCTCGGCCC TGTCGCTGGTGGAGGCGTTCTGA
Upstream 100 bases:
>100_bases ACTACGCGACCAAGGACGAAGTGATCCTGACCGTCTCGCAGGCTATCGCCTCGAACAATCGGCGCCAGTCAGACCAGCAA TATCTCAGGGGTAGCCGCTG
Downstream 100 bases:
>100_bases TGAGCATCCACGACATACCGGACGAGGTGCTGCGCCGGGGCGTCACCGGCTGCACGATCCTGTGCCAGATGGATTTCAAG ACGAACCCCAAGAACTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MQVSFPFPVKLQSSVPKLEGLRFQPFTNIDSETFAKPALNGFWRLDMTVLAHDMQSHLALSSFVTQMSAAGTTCVVPVCT QWRPNDQNGRRLTGCDMAPAYTFDHVGFLGEPFDGFTLRAAAAHRASYIDIDKPAMSQLWPGHFISLGDRLHQVVNTTSI GESETAIRVSIMPNIREAQPSGTVVIVDQLRLKVMMESGDQIGLGTGRFRSSALSLVEAF
Sequences:
>Translated_220_residues MQVSFPFPVKLQSSVPKLEGLRFQPFTNIDSETFAKPALNGFWRLDMTVLAHDMQSHLALSSFVTQMSAAGTTCVVPVCT QWRPNDQNGRRLTGCDMAPAYTFDHVGFLGEPFDGFTLRAAAAHRASYIDIDKPAMSQLWPGHFISLGDRLHQVVNTTSI GESETAIRVSIMPNIREAQPSGTVVIVDQLRLKVMMESGDQIGLGTGRFRSSALSLVEAF >Mature_220_residues MQVSFPFPVKLQSSVPKLEGLRFQPFTNIDSETFAKPALNGFWRLDMTVLAHDMQSHLALSSFVTQMSAAGTTCVVPVCT QWRPNDQNGRRLTGCDMAPAYTFDHVGFLGEPFDGFTLRAAAAHRASYIDIDKPAMSQLWPGHFISLGDRLHQVVNTTSI GESETAIRVSIMPNIREAQPSGTVVIVDQLRLKVMMESGDQIGLGTGRFRSSALSLVEAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24177; Mature: 24177
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSFPFPVKLQSSVPKLEGLRFQPFTNIDSETFAKPALNGFWRLDMTVLAHDMQSHLAL CCCCCCCCEEECCCCCHHCCEEECCCCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHH SSFVTQMSAAGTTCVVPVCTQWRPNDQNGRRLTGCDMAPAYTFDHVGFLGEPFDGFTLRA HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCEEEEH AAAHRASYIDIDKPAMSQLWPGHFISLGDRLHQVVNTTSIGESETAIRVSIMPNIREAQP HHHHCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC SGTVVIVDQLRLKVMMESGDQIGLGTGRFRSSALSLVEAF CCCEEEEEHHEEEHHHCCCCEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MQVSFPFPVKLQSSVPKLEGLRFQPFTNIDSETFAKPALNGFWRLDMTVLAHDMQSHLAL CCCCCCCCEEECCCCCHHCCEEECCCCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHH SSFVTQMSAAGTTCVVPVCTQWRPNDQNGRRLTGCDMAPAYTFDHVGFLGEPFDGFTLRA HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCEEEEH AAAHRASYIDIDKPAMSQLWPGHFISLGDRLHQVVNTTSIGESETAIRVSIMPNIREAQP HHHHCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC SGTVVIVDQLRLKVMMESGDQIGLGTGRFRSSALSLVEAF CCCEEEEEHHEEEHHHCCCCEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA