Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386306

Identifier: 119386306

GI number: 119386306

Start: 748251

End: 748835

Strand: Direct

Name: 119386306

Synonym: Pden_3598

Alternate gene names: NA

Gene position: 748251-748835 (Clockwise)

Preceding gene: 119386305

Following gene: 119386308

Centisome position: 43.25

GC content: 64.44

Gene sequence:

>585_bases
ATGAGCATCCACGACATACCGGACGAGGTGCTGCGCCGGGGCGTCACCGGCTGCACGATCCTGTGCCAGATGGATTTCAA
GACGAACCCCAAGAACTGGTGGCTCGGCTATGGCCCGCTGACCGCTGGCGGGGTCGAATATCAGGGCACGGGCGACGTGA
TCCAGATCAGCGCCATGGAACTGACCTACGGCATGTCGGCGGGAATGGTGCGGTTCACCATCCCGAACGCCTCGCCCGAG
ATGATCGCGCTCTGCGACGATCAGGGCGCCGAGGTCAACGGGCGCCGGGTGCAGGTGCTGTATCAGCTTTTCGCAACGGA
CGAGCGCGACGGTGAGCACCGGGGACGGCTGATCGGCGATCCGATGAGCGTGTTCGTCGGCCGCATGAAGGACATGACCA
GCACGTCCAGCGCAGACGCCCGCACCATCGAACTGGAATGCTACGGGCGCATGTCGCAGCAGGGCAAGCCGCCTTACGGG
CGCTGGACCCACACCGACCAGCAGCGCCGCTATCCGGGCGATACCGGGTTGGAACTGCTGGCAACGCTCAAGGACAAGGC
AATCACCTGGGTGCCAGGAAGCTAA

Upstream 100 bases:

>100_bases
ATCAGCTACGGCTCAAGGTGATGATGGAGTCCGGCGACCAGATCGGCCTCGGGACGGGGCGTTTCCGTTCCTCGGCCCTG
TCGCTGGTGGAGGCGTTCTG

Downstream 100 bases:

>100_bases
AGGAGATCGTTATGAAATATCTTCGCCGTCTATCACCTCTGCGGCTCGTCGCAAAAATTGAACAGCGGATTGCCGAGCGA
GTGCTTCGGCGTCTCGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAMELTYGMSAGMVRFTIPNASPE
MIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGDPMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYG
RWTHTDQQRRYPGDTGLELLATLKDKAITWVPGS

Sequences:

>Translated_194_residues
MSIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAMELTYGMSAGMVRFTIPNASPE
MIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGDPMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYG
RWTHTDQQRRYPGDTGLELLATLKDKAITWVPGS
>Mature_193_residues
SIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAMELTYGMSAGMVRFTIPNASPEM
IALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGDPMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYGR
WTHTDQQRRYPGDTGLELLATLKDKAITWVPGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21529; Mature: 21398

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAME
CCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCEEEEEEEE
LTYGMSAGMVRFTIPNASPEMIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGD
EEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHEEHHHHHHCCCCCCCCCCCEECC
PMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYGRWTHTDQQRRYPGDTGLELL
HHHHHHHHHHHCCCCCCCCCEEEEEEEEECHHCCCCCCCCCCCCCCCHHCCCCCCHHHHH
ATLKDKAITWVPGS
HHHHCCEEEECCCC
>Mature Secondary Structure 
SIHDIPDEVLRRGVTGCTILCQMDFKTNPKNWWLGYGPLTAGGVEYQGTGDVIQISAME
CCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCEEEEEEEE
LTYGMSAGMVRFTIPNASPEMIALCDDQGAEVNGRRVQVLYQLFATDERDGEHRGRLIGD
EEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHEEHHHHHHCCCCCCCCCCCEECC
PMSVFVGRMKDMTSTSSADARTIELECYGRMSQQGKPPYGRWTHTDQQRRYPGDTGLELL
HHHHHHHHHHHCCCCCCCCCEEEEEEEEECHHCCCCCCCCCCCCCCCHHCCCCCCHHHHH
ATLKDKAITWVPGS
HHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA