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The map label for this gene is allC [C]

Identifier: 119386226

GI number: 119386226

Start: 660347

End: 661585

Strand: Direct

Name: allC [C]

Synonym: Pden_3515

Alternate gene names: 119386226

Gene position: 660347-661585 (Clockwise)

Preceding gene: 119386225

Following gene: 119386227

Centisome position: 38.17

GC content: 68.6

Gene sequence:

>1239_bases
ATGCGGCGCAATCTCGACGCCTCGGCCGAGGCAATCGGCAGGGATATCGATGCGCTGGCCCGGATCACCGATCCCGGGCG
CCCATGGACGCGCCGCGCCTTCTCGCCCCGTTTCGACGAGGGGCGCGACCATCTGCGCCGGCGCTTCGTCGCAGGGGGGT
TGCAGGTCTCGACCGATGCGGGCGGCAACCTGATCGGCCTGCGCAAGGGCACCCGGCCGGGGGCGGGGACGATCATGCTG
GGCTCCCATTCGGATACCGTGCCGGATGGCGGGCGTTTCGACGGGATTGCGGGCGTCGTCGTGGCGCTGGAGGTCGCGCG
CATCCTTGCCCGCCGCGGTGCCGTCCTGCGTCACGATCTTGCCGTGGTCGATTTCCTGGCCGAAGAGGTTTCGGTCTTCG
GCGTCTCTTGCATCGGTTCGCGGGCAATGGCCGGGGTGCTGCCGCAGGATTGGCTGGGACGCACCAGCGACGGGCGTGAT
CTTGCGCGGGCAATGGCGGATGTGGGCGGTGTTCCCGAAAGCCTTCACGGGCCGCTGCGCGACGATCTGAAGGCCTTTCT
GGAGCTGCATATCGAACAGGGCCCGGTGCTGGAGGCCGAAAGGATCGGGCTTGGCATCGTCACGGCCATCGTCGGCATCA
CCCGTGTCGAGATCGTGATCTCTGGCCGCCCGGACCATGCCGGCACCACCCCCATGGGGCTGCGCGCCGATGCGCTTGCC
GCCTCGGCCCGGATCGTGACCCAGATCGAGGCCCGCGCGACGGAGCTGTCGGCCGGTCCCGCGCATTTCACCGCCACGGT
CGGCGAATTCGAGATATCTCCGAATGCTGCCAATGTCGTGCCCGCCCGTGTCCGCATGCTTGTCGATATCCGCGCCGAGC
GCGCCAGGGACAAAGAGGCCTTCGTGACCTGGTTGACGGGTCTTGAAGCCGCGCCCGGCATCACCGTCGAAACGCGGCTG
ATTTCGGACAATCCCGGCGTGGGCATGGATGACGGCTTGCAGCGGAAACTGGCCGAAGCCGCCGACGGGCTGGGCGCGGC
CTGTCGCAGGATGGTGTCGGGTGCGGGCCACGATGCGGCCTTCATGGCGCGGCTTTGCCCCTCGGCGATGGTGTTCGTGC
CATGCCGCGAGGGCCGCTCGCATTGCCCCGAGGAATGGGCCGAGACAGCCGACCTCGCCCTGGCGGCCGAGGTGCTGGCG
AACACGGTCATGGAACTGGACAGGAAACGGGAGGGCTGA

Upstream 100 bases:

>100_bases
GCGAGATGGTCTTTGACGGGACCGAGGTCCTTGCCGTGCCGGGGACCGGCATCTTCGTGCGCCCGCCCGAAACGCTCGGC
CTGCGCGAAGGGTTGCTGTG

Downstream 100 bases:

>100_bases
AATGGCCAGAGTTCTGACGGAAAAGGATGTCGAATCCGCGGTGCGCGGCGGTGCGGTTTATGCGGCGGGCGGCGGCGGTT
GGGTTCATCACGGGCGCATG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRRNLDASAEAIGRDIDALARITDPGRPWTRRAFSPRFDEGRDHLRRRFVAGGLQVSTDAGGNLIGLRKGTRPGAGTIML
GSHSDTVPDGGRFDGIAGVVVALEVARILARRGAVLRHDLAVVDFLAEEVSVFGVSCIGSRAMAGVLPQDWLGRTSDGRD
LARAMADVGGVPESLHGPLRDDLKAFLELHIEQGPVLEAERIGLGIVTAIVGITRVEIVISGRPDHAGTTPMGLRADALA
ASARIVTQIEARATELSAGPAHFTATVGEFEISPNAANVVPARVRMLVDIRAERARDKEAFVTWLTGLEAAPGITVETRL
ISDNPGVGMDDGLQRKLAEAADGLGAACRRMVSGAGHDAAFMARLCPSAMVFVPCREGRSHCPEEWAETADLALAAEVLA
NTVMELDRKREG

Sequences:

>Translated_412_residues
MRRNLDASAEAIGRDIDALARITDPGRPWTRRAFSPRFDEGRDHLRRRFVAGGLQVSTDAGGNLIGLRKGTRPGAGTIML
GSHSDTVPDGGRFDGIAGVVVALEVARILARRGAVLRHDLAVVDFLAEEVSVFGVSCIGSRAMAGVLPQDWLGRTSDGRD
LARAMADVGGVPESLHGPLRDDLKAFLELHIEQGPVLEAERIGLGIVTAIVGITRVEIVISGRPDHAGTTPMGLRADALA
ASARIVTQIEARATELSAGPAHFTATVGEFEISPNAANVVPARVRMLVDIRAERARDKEAFVTWLTGLEAAPGITVETRL
ISDNPGVGMDDGLQRKLAEAADGLGAACRRMVSGAGHDAAFMARLCPSAMVFVPCREGRSHCPEEWAETADLALAAEVLA
NTVMELDRKREG
>Mature_412_residues
MRRNLDASAEAIGRDIDALARITDPGRPWTRRAFSPRFDEGRDHLRRRFVAGGLQVSTDAGGNLIGLRKGTRPGAGTIML
GSHSDTVPDGGRFDGIAGVVVALEVARILARRGAVLRHDLAVVDFLAEEVSVFGVSCIGSRAMAGVLPQDWLGRTSDGRD
LARAMADVGGVPESLHGPLRDDLKAFLELHIEQGPVLEAERIGLGIVTAIVGITRVEIVISGRPDHAGTTPMGLRADALA
ASARIVTQIEARATELSAGPAHFTATVGEFEISPNAANVVPARVRMLVDIRAERARDKEAFVTWLTGLEAAPGITVETRL
ISDNPGVGMDDGLQRKLAEAADGLGAACRRMVSGAGHDAAFMARLCPSAMVFVPCREGRSHCPEEWAETADLALAAEVLA
NTVMELDRKREG

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=395, Percent_Identity=34.6835443037975, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 43714; Mature: 43714

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNLDASAEAIGRDIDALARITDPGRPWTRRAFSPRFDEGRDHLRRRFVAGGLQVSTDA
CCCCCCCHHHHHCCCHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCEEEECCC
GGNLIGLRKGTRPGAGTIMLGSHSDTVPDGGRFDGIAGVVVALEVARILARRGAVLRHDL
CCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
AVVDFLAEEVSVFGVSCIGSRAMAGVLPQDWLGRTSDGRDLARAMADVGGVPESLHGPLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHCCCHH
DDLKAFLELHIEQGPVLEAERIGLGIVTAIVGITRVEIVISGRPDHAGTTPMGLRADALA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHH
ASARIVTQIEARATELSAGPAHFTATVGEFEISPNAANVVPARVRMLVDIRAERARDKEA
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
FVTWLTGLEAAPGITVETRLISDNPGVGMDDGLQRKLAEAADGLGAACRRMVSGAGHDAA
HHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH
FMARLCPSAMVFVPCREGRSHCPEEWAETADLALAAEVLANTVMELDRKREG
HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRNLDASAEAIGRDIDALARITDPGRPWTRRAFSPRFDEGRDHLRRRFVAGGLQVSTDA
CCCCCCCHHHHHCCCHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCEEEECCC
GGNLIGLRKGTRPGAGTIMLGSHSDTVPDGGRFDGIAGVVVALEVARILARRGAVLRHDL
CCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
AVVDFLAEEVSVFGVSCIGSRAMAGVLPQDWLGRTSDGRDLARAMADVGGVPESLHGPLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHCCCHH
DDLKAFLELHIEQGPVLEAERIGLGIVTAIVGITRVEIVISGRPDHAGTTPMGLRADALA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHH
ASARIVTQIEARATELSAGPAHFTATVGEFEISPNAANVVPARVRMLVDIRAERARDKEA
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
FVTWLTGLEAAPGITVETRLISDNPGVGMDDGLQRKLAEAADGLGAACRRMVSGAGHDAA
HHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH
FMARLCPSAMVFVPCREGRSHCPEEWAETADLALAAEVLANTVMELDRKREG
HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]