Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386227
Identifier: 119386227
GI number: 119386227
Start: 661587
End: 662678
Strand: Direct
Name: 119386227
Synonym: Pden_3516
Alternate gene names: NA
Gene position: 661587-662678 (Clockwise)
Preceding gene: 119386226
Following gene: 119386228
Centisome position: 38.24
GC content: 66.39
Gene sequence:
>1092_bases ATGGCCAGAGTTCTGACGGAAAAGGATGTCGAATCCGCGGTGCGCGGCGGTGCGGTTTATGCGGCGGGCGGCGGCGGTTG GGTTCATCACGGGCGCATGCTGGGCTATGCGGCGGTCAATGCCGGCGCGCCCGAACTCGTCTCGGTCGACGAGTTGCATG AGGACGACTGGGTCGCCACGGCCGCGGCCATCGGCGCGCCCGCCTCGACAACGCCATGGGAGATGCGCGGCGTGGACTAC GTCAAGGCCGTGCAGCTTTTGCAGGATGCGCTTGGCGCGAAGGTCGCGGCGCTGATGATCGGGCAGAACGGCAAGTCCTC GACGCTGAACGCCTGGCTTCCCTCGGCCATTCTTGGCTGCAAGGTGCTGGATGCGGTCGGCGACATGCGGGCGCATCCGA CCGGCGACATGGGCGCGATCGGCATGGCCGGCAAGCCCGACGAATCCATCCAGACCGCGGTCGGCGGCAATCGCGAGCAG AACCGCTATATCGAACTGGTCGCGCGCGGGGCGACCGGCCGCGTCTCGCCCATCCTGCGCACGGCATCCGATATGTCGGG CGGCTTCATCGCTTCGGCGCGCAATCCGGTCCGCGCCGGCTATGTAGCCCGAAACGCGGCCCTTGGCGGCATCTCCAGGG CGCTGGAACTGGGGCACGCCATCATCGCAGCCGAACCGAAGGGCACCGCGGCCGTGCTTGACGCGATCATCGCGACGACC GGCGGCACCATCCTGACCGAGAGCGAGATCACCGCCATGGATGTCGTCTATACGAACGAGGCCTTCGATGTCGGCACCGT CACGCTGGGCGCGGGCGACAAGGCGCTGACGCTTCACGTGATGAACGAATACATGGCGGTCAGCGCCGCCGACGGCAGCC GCCTTGCGACCTTTCCGGATGTCATCACCACCCTGTCGCAGGAGATGGAGCCGCTGTCGGTCGGCGAACTCAGGGTGGGG ATGAAGGTTCATCTGCTGCATGTCGCCAAGGCCCTGATCCCGGTCGGCGCGGGGCTGATGGACCCCGCGATCTATGTTCA CCCCGAAAAGGTCATGGGCATCAACCTGACCGATTATGCGTTGGCGGTTTGA
Upstream 100 bases:
>100_bases CATTGCCCCGAGGAATGGGCCGAGACAGCCGACCTCGCCCTGGCGGCCGAGGTGCTGGCGAACACGGTCATGGAACTGGA CAGGAAACGGGAGGGCTGAA
Downstream 100 bases:
>100_bases GCATGCCCAGGGACAATCCACGCAATCCCGGCTTCCCGATCCCTTCGGGATCCGAACTGCGCGCCAAGGGCTGGCGGCAA GAGGCGCTGCTGCGGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVATAAAIGAPASTTPWEMRGVDY VKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGCKVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQ NRYIELVARGATGRVSPILRTASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPDVITTLSQEMEPLSVGELRVG MKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYALAV
Sequences:
>Translated_363_residues MARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVATAAAIGAPASTTPWEMRGVDY VKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGCKVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQ NRYIELVARGATGRVSPILRTASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPDVITTLSQEMEPLSVGELRVG MKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYALAV >Mature_362_residues ARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVATAAAIGAPASTTPWEMRGVDYV KAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGCKVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQN RYIELVARGATGRVSPILRTASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATTG GTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPDVITTLSQEMEPLSVGELRVGM KVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYALAV
Specific function: Unknown
COG id: COG3535
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37461; Mature: 37330
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVAT CCCCCCHHHHHHHHCCCEEEEECCCCEEECCEEEEEEEECCCCCCEEEHHHHCCCCHHHH AAAIGAPASTTPWEMRGVDYVKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGC HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHH KVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQNRYIELVARGATGRVSPILR HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH TASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT HHCCCCCCEEECCCCCCHHCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCC GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPD CCCEEECCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCHHEEECCCCCCCCHHHH VITTLSQEMEPLSVGELRVGMKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYA HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCHHHE LAV EEC >Mature Secondary Structure ARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVAT CCCCCHHHHHHHHCCCEEEEECCCCEEECCEEEEEEEECCCCCCEEEHHHHCCCCHHHH AAAIGAPASTTPWEMRGVDYVKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGC HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHH KVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQNRYIELVARGATGRVSPILR HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH TASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT HHCCCCCCEEECCCCCCHHCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCC GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPD CCCEEECCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCHHEEECCCCCCCCHHHH VITTLSQEMEPLSVGELRVGMKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYA HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCHHHE LAV EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA