Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386227

Identifier: 119386227

GI number: 119386227

Start: 661587

End: 662678

Strand: Direct

Name: 119386227

Synonym: Pden_3516

Alternate gene names: NA

Gene position: 661587-662678 (Clockwise)

Preceding gene: 119386226

Following gene: 119386228

Centisome position: 38.24

GC content: 66.39

Gene sequence:

>1092_bases
ATGGCCAGAGTTCTGACGGAAAAGGATGTCGAATCCGCGGTGCGCGGCGGTGCGGTTTATGCGGCGGGCGGCGGCGGTTG
GGTTCATCACGGGCGCATGCTGGGCTATGCGGCGGTCAATGCCGGCGCGCCCGAACTCGTCTCGGTCGACGAGTTGCATG
AGGACGACTGGGTCGCCACGGCCGCGGCCATCGGCGCGCCCGCCTCGACAACGCCATGGGAGATGCGCGGCGTGGACTAC
GTCAAGGCCGTGCAGCTTTTGCAGGATGCGCTTGGCGCGAAGGTCGCGGCGCTGATGATCGGGCAGAACGGCAAGTCCTC
GACGCTGAACGCCTGGCTTCCCTCGGCCATTCTTGGCTGCAAGGTGCTGGATGCGGTCGGCGACATGCGGGCGCATCCGA
CCGGCGACATGGGCGCGATCGGCATGGCCGGCAAGCCCGACGAATCCATCCAGACCGCGGTCGGCGGCAATCGCGAGCAG
AACCGCTATATCGAACTGGTCGCGCGCGGGGCGACCGGCCGCGTCTCGCCCATCCTGCGCACGGCATCCGATATGTCGGG
CGGCTTCATCGCTTCGGCGCGCAATCCGGTCCGCGCCGGCTATGTAGCCCGAAACGCGGCCCTTGGCGGCATCTCCAGGG
CGCTGGAACTGGGGCACGCCATCATCGCAGCCGAACCGAAGGGCACCGCGGCCGTGCTTGACGCGATCATCGCGACGACC
GGCGGCACCATCCTGACCGAGAGCGAGATCACCGCCATGGATGTCGTCTATACGAACGAGGCCTTCGATGTCGGCACCGT
CACGCTGGGCGCGGGCGACAAGGCGCTGACGCTTCACGTGATGAACGAATACATGGCGGTCAGCGCCGCCGACGGCAGCC
GCCTTGCGACCTTTCCGGATGTCATCACCACCCTGTCGCAGGAGATGGAGCCGCTGTCGGTCGGCGAACTCAGGGTGGGG
ATGAAGGTTCATCTGCTGCATGTCGCCAAGGCCCTGATCCCGGTCGGCGCGGGGCTGATGGACCCCGCGATCTATGTTCA
CCCCGAAAAGGTCATGGGCATCAACCTGACCGATTATGCGTTGGCGGTTTGA

Upstream 100 bases:

>100_bases
CATTGCCCCGAGGAATGGGCCGAGACAGCCGACCTCGCCCTGGCGGCCGAGGTGCTGGCGAACACGGTCATGGAACTGGA
CAGGAAACGGGAGGGCTGAA

Downstream 100 bases:

>100_bases
GCATGCCCAGGGACAATCCACGCAATCCCGGCTTCCCGATCCCTTCGGGATCCGAACTGCGCGCCAAGGGCTGGCGGCAA
GAGGCGCTGCTGCGGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVATAAAIGAPASTTPWEMRGVDY
VKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGCKVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQ
NRYIELVARGATGRVSPILRTASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT
GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPDVITTLSQEMEPLSVGELRVG
MKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYALAV

Sequences:

>Translated_363_residues
MARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVATAAAIGAPASTTPWEMRGVDY
VKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGCKVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQ
NRYIELVARGATGRVSPILRTASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT
GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPDVITTLSQEMEPLSVGELRVG
MKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYALAV
>Mature_362_residues
ARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVATAAAIGAPASTTPWEMRGVDYV
KAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGCKVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQN
RYIELVARGATGRVSPILRTASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATTG
GTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPDVITTLSQEMEPLSVGELRVGM
KVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYALAV

Specific function: Unknown

COG id: COG3535

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37461; Mature: 37330

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVAT
CCCCCCHHHHHHHHCCCEEEEECCCCEEECCEEEEEEEECCCCCCEEEHHHHCCCCHHHH
AAAIGAPASTTPWEMRGVDYVKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGC
HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHH
KVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQNRYIELVARGATGRVSPILR
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH
TASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT
HHCCCCCCEEECCCCCCHHCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCC
GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPD
CCCEEECCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCHHEEECCCCCCCCHHHH
VITTLSQEMEPLSVGELRVGMKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYA
HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCHHHE
LAV
EEC
>Mature Secondary Structure 
ARVLTEKDVESAVRGGAVYAAGGGGWVHHGRMLGYAAVNAGAPELVSVDELHEDDWVAT
CCCCCHHHHHHHHCCCEEEEECCCCEEECCEEEEEEEECCCCCCEEEHHHHCCCCHHHH
AAAIGAPASTTPWEMRGVDYVKAVQLLQDALGAKVAALMIGQNGKSSTLNAWLPSAILGC
HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHH
KVLDAVGDMRAHPTGDMGAIGMAGKPDESIQTAVGGNREQNRYIELVARGATGRVSPILR
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH
TASDMSGGFIASARNPVRAGYVARNAALGGISRALELGHAIIAAEPKGTAAVLDAIIATT
HHCCCCCCEEECCCCCCHHCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCC
GGTILTESEITAMDVVYTNEAFDVGTVTLGAGDKALTLHVMNEYMAVSAADGSRLATFPD
CCCEEECCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCHHEEECCCCCCCCHHHH
VITTLSQEMEPLSVGELRVGMKVHLLHVAKALIPVGAGLMDPAIYVHPEKVMGINLTDYA
HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCHHHE
LAV
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA