Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386186
Identifier: 119386186
GI number: 119386186
Start: 620705
End: 622696
Strand: Direct
Name: 119386186
Synonym: Pden_3474
Alternate gene names: NA
Gene position: 620705-622696 (Clockwise)
Preceding gene: 119386185
Following gene: 119386189
Centisome position: 35.88
GC content: 68.02
Gene sequence:
>1992_bases ATGACCGAGCAACATCCCTCCCGCCATGTCTTCCGCACCAGCCAGTTGGAGGAGGCCGACGGACCGGGCCACAATCCGAC CGAAAATCGCACCATGGGCGAAATCATCGCGGCCCGCTTCTCGCGCCGCGGCTTCCTGAAGGGCTCGATGGCTGCGACCG CGATCTCGGCCACCGTCAGCCCCTTCGCCCTGCTGGCTGCCGACGAGGCCCGCGCCCAGGATGCCGTCGAGGGCTCCGCC TTCAGCTTTCCCGAGGTCGAGGCGGGCGTCGATGCCGACCATCACGTCGCCCAGGGCTATGACGCGGACATCCTGCTGCG CTGGGGCGACAAGGTCTTTGCCGATGCGCCGGATTTCGACCCGAAGAACCAGTCCGAGGCCGCGCAGGAACGCCAGTTCG GCTATAACAACGACTTCGTCGGCTTCATCCCGCTGGACGGCGCCGATGACCGCGGCCTGCTGGTCGTCAACCACGAATAT ACCAACGAACACCTGATGTTCCCCGGCATCGTTACCGTCGAGGACGGCAAGATCGCCGTGGCCGAGGCGACCGAGGCGCG CGTGGACATCGAGATGGCCGCGCATGGCGGCACGGTGATCGAGATCCGCAAGGTGGACGGAAAATGGCAGCCGGTGCTGG ACGGCGCGCTGAACCGCCGCATCACCGCCAAGACGCCGATGGAGATCTGCGGCCCGGCCACCGGGCATGCGCGGATGCAG ACCGCGGCGGACCCGACCGGCACCCGCGTCCTGGGCACGATCAACAACTGCGCCGGCGGCGTCACGCCCTGGGGCACCTA CATCATGGCCGAGGAGAACATCCACGGCTATTTCACCGGCGCGCTGCCCGAAGGCCACCGCGAGGCCGAAAACTACAAGC GCATGGGCATCCCCGAGGACAGCTATGCCTGGGGCAGGTTCCACGACCGCTTCGACATCGGCAAGGAACCGAACGAGCCC AACCGCTTTGGCTGGATCGTCGAGGTCGATGTCATGGACCCCACCTCGACCCCCAGGAAGCGCACCGCGCTTGGCCGCTT CAAGCACGAGGGGGCGGCGAGCGCCTTGGCCAAGGACGGCCGCGTCGTCTTCTACCTGGGCGACGATGAGCGTTTCGACT ATGTCTACAAGTTCGTGACCGCCGGCCGCTACAACCCGGACGACCGCGCCGCGAACCTGGACCTGCTGGACGAGGGCACG CTTTACGTCGCGCGCTTCGACGAGGATGGCAGCTTCGTCTGGCTGCCGCTGGTGCATGGGCAGGGGCCGCTGACCGCCGA GAACGGCTTCGAGAGCCAGGCCGACGTGCTGATCGAGACCCGCCGCGCCGCCGACCTGCTGGGCGCGACGCCGATGGACC GCCCCGAGGACATCGAGCCCAATGCCGAGACCGGCCGGGCCTATGTCATGCTGACCAACAACACCAAGCGCGAAGAGGCG AACGCCGCCAACCCGCGCGTGGAGAACGCCTTCGGCCATATCATCGAGATTCTCGAGGATGGCGGCGACCTGGCGGCGAC GCAGGGCACCTGGGAGATCCTGCTGCAATGCGGCGATCCTTCGGTGGCCGAGGTCGGCGCGACCTTCTCGACCGCGACCA CTGCGAATGGCTGGTTCGGCATGCCCGACAACTGCGCCATCGACAGCGACGGGCGGCTGTGGGTCTCGACCGACGGCAAC TCGCCCAAGGATACGGGCCGCACCGACGGCCTGTGGGCGGTGGATGTCGAGGGCGCCGCGCGGGGCACCTCGCGGCTGTT CTATCGGGTGCCCGTGGGTGCCGAGATGTGCGGCCCCTGTCCGACGCCGGACCTGACCACCTTTTTCGTGGCCGTGCAGC ATCCGGGCGATGGCGGCGAGGATTGGGAGGGCCACGGCCGGCCGTCCTATTACGAGGACCTGTCGACCCGCTGGCCGGAT TTCCGCGACGACATGCCGGTGCGCCCGGCGGTGGTGGCGATCACGAAACAGGGCGGCGGCCGGATCGGCTGA
Upstream 100 bases:
>100_bases CCATCGTTTCCGGCCCTGTCACTCTTTGGTCAAACTGGGCCGCTATGGAGGGGTCGGTCCCGTCTCTGGCCGGGGCCGCC CCATCAGCCAGGAGCGTCTC
Downstream 100 bases:
>100_bases CCGGACGCCGGATCGGGAAAGGGGGCGAAAGACCGCCCCCTTTTCCGCTTGCCGGCCCTGCGCCGATGACCTTGTTTGCC CTTCCGCCCTCAGCCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
>663_residues MTEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVSPFALLAADEARAQDAVEGSA FSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFDPKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEY TNEHLMFPGIVTVEDGKIAVAEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPEDSYAWGRFHDRFDIGKEPNEP NRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDGRVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGT LYVARFDEDGSFVWLPLVHGQGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFGMPDNCAIDSDGRLWVSTDGN SPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPCPTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPD FRDDMPVRPAVVAITKQGGGRIG
Sequences:
>Translated_663_residues MTEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVSPFALLAADEARAQDAVEGSA FSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFDPKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEY TNEHLMFPGIVTVEDGKIAVAEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPEDSYAWGRFHDRFDIGKEPNEP NRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDGRVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGT LYVARFDEDGSFVWLPLVHGQGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFGMPDNCAIDSDGRLWVSTDGN SPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPCPTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPD FRDDMPVRPAVVAITKQGGGRIG >Mature_662_residues TEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVSPFALLAADEARAQDAVEGSAF SFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFDPKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEYT NEHLMFPGIVTVEDGKIAVAEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQT AADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPEDSYAWGRFHDRFDIGKEPNEPN RFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDGRVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGTL YVARFDEDGSFVWLPLVHGQGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEAN AANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFGMPDNCAIDSDGRLWVSTDGNS PKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPCPTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPDF RDDMPVRPAVVAITKQGGGRIG
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72278; Mature: 72146
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVS CCCCCCCCCEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC PFALLAADEARAQDAVEGSAFSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFD CEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEECCCCCCC PKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEYTNEHLMFPGIVTVEDGKIAV CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEECCCEEE AEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ EECCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCEEECCCCHHHCCCCCCCCEEE TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPED ECCCCCCCEEEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCC SYAWGRFHDRFDIGKEPNEPNRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDG CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCC RVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGTLYVARFDEDGSFVWLPLVHG EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEEEEC QGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA CCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFG CCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHCCEEECCCCCCCCCC MPDNCAIDSDGRLWVSTDGNSPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPC CCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHCCCC PTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPDFRDDMPVRPAVVAITKQGGG CCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC RIG CCC >Mature Secondary Structure TEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVS CCCCCCCCEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC PFALLAADEARAQDAVEGSAFSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFD CEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEECCCCCCC PKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEYTNEHLMFPGIVTVEDGKIAV CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEECCCEEE AEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ EECCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCEEECCCCHHHCCCCCCCCEEE TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPED ECCCCCCCEEEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCC SYAWGRFHDRFDIGKEPNEPNRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDG CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCC RVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGTLYVARFDEDGSFVWLPLVHG EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEEEEC QGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA CCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFG CCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHCCEEECCCCCCCCCC MPDNCAIDSDGRLWVSTDGNSPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPC CCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHCCCC PTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPDFRDDMPVRPAVVAITKQGGG CCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC RIG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA