Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is cya3 [H]
Identifier: 119386185
GI number: 119386185
Start: 618747
End: 620537
Strand: Direct
Name: cya3 [H]
Synonym: Pden_3473
Alternate gene names: 119386185
Gene position: 618747-620537 (Clockwise)
Preceding gene: 119386181
Following gene: 119386186
Centisome position: 35.76
GC content: 67.9
Gene sequence:
>1791_bases ATGCCCGAAAGGAGCCTTGGACGAGCCATGATCGCACAGCCCGGTCTGACCGGCCCCCGCCTTCAGGCGGTGCTTTATGC CGACATTCACGGCTATACCCGCCTGATCGAGCAGGACGAGGCCGGCACGATCCTGCGGCTGACGCGCTCGATCGCGCTGA TCCGCAACCTGGTCGGGGATTATGGCGGCACCGTGGTCAACACGGCCGGGGACGGGCTGGTCGCGGTGTTCCAGGATGCG CCCAAGGCGCTGCATTTCGCGATCGAGATGCAGCGCGAACTGTCCCGCGAATCCGCCTGGGCCGAGGCGCGGGAGCCGAT CGCCTGGCGCGTCGGCATCTCGCTGGGCGAGACGTTCGAGGGGCAGGAGGGGGTTTACGGCCACAGCGTCAACCTGGCCG CGCGGATCCAGGGCTTTGCCGATCCCGGCGGCATCTGCGTCACCGAGACCGTCTATCGCATCGTGCGCGACAACCCGGAA CTGGTGCTGCGTTCGCTGGGGCGGCGGCGGCTGAAGAACATCTCGGCCCCGGTCGAGATCTATGCCGCGGCGCCCGCCTC CCCCGCCGCGGCCGCGGCCGTCCCGCTGCGAGCTGTGCCGCGCAGGGTCGATCCCGGCCTGCCCGACACGTCGCTGGCGA TCCTGCCGATGGAGAATCTTTCGGCCGATCCCGGCGACCAGCACCTGTGCCATGGCATCGTCGCCGACCTGATCACCAAC CTGTGCCGGTTCCGGCACCTGCTGGTGATCGCGCGGCATTCATCGTTCCTGGCCGCCGCCCAGACCTCGTCGCTGCGCGA GATCGGGCGCCGGCTGGGCGTGCGCTACCTGATGACCAGCAGCTTTCGCCGGGCCGGCAACCGGCTGCGCATCACCGTCG AGCTGGTCGAGGCGGAATCGGAAAATACCATCTGGTCCGAGCGCTACGACGGCGTGATGCTGGACATCTTCGACTTTCAG GACGACGTGACCGCGATGACCGCCGCCCGGGTGGCGATCCAGCTGGACGCGAACGAACGGCGCCGGCTGGCCGAGCAGAG CCATCCCGCGCTTTACGCCTATGGGCTGGTCCTGCGCGGCCAGGACATGGGCCTGCGCTTCCTGCCCGATGCCAACCTGC ACGCCCGCCGCCTGTTCGAAGAGGCCCGCGATCTCGATCCCGACTACGGCCGCAGCTATGCGGCGATGTCGCGGACCTTC AACGTCGAATGGCGCTACAACTGGACCAGCAACCCCGATGCGGCGCTGAACCAGGCGCTGGTCCTGGCCAAGCGGGCGGT GCAATGCGACGCCCTGGACTCGCGCGGCTTTTCCGAGATGGGCCTGGCGCATCTCTACAAGAAGCAGCACGACGAGGCGC TGGCCGCCTATGAGCACGCGCTGGCGCTGAATCCCAACGACGCGGATCTGCTGGCCTATACCGGCGACTGCCTCGCCTAT GTCCGGCAGGGCGAGCGGGCGGTGCAGCTGCTGGAACGGGCGATGCGGCTCAATCCCTATTTCCCGGACGCCTATCTGTG GTTCCTGGGCGATGCCTATTTCCACCACGGCGATTACGGCAAGACCATCGAAACCCTTTCGCGGATGCGCGACCAGTCCG AGGCGCACCGGCTGCTGGCCGCCAGCCATGCGCTGCTGGGCCAGATGGACGAGGCCCGCCGCCATGCCGGCGCGGTGATG CGGGTGCATCCGAACTTCACCATCGCGCATTGGCGCAAGGTGCCCCCGCTGAAACATGCCGAGGACCTGGAGCTTTACGT CGAGGGCTTGCGAAAGGCCGGCCTGACCTGA
Upstream 100 bases:
>100_bases GGATAGTATAGTGCCGATCCGGGCGCTGTCACGGATCCCCTTGCGGCAGGCCGGGCCGCCCCGATCCGGGCTTGACAGGC CGGGTGCCGGTGGATTTCTG
Downstream 100 bases:
>100_bases CGGCGGGCGGCGGTAAGGTCGCCCGCAGCGGCTATCGGGCCCGCCGCCTTGGTGGGCCGGGTCCGCGCCATCGTTTCCGG CCCTGTCACTCTTTGGTCAA
Product: adenylyl cyclase class-3/4/guanylyl cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MPERSLGRAMIAQPGLTGPRLQAVLYADIHGYTRLIEQDEAGTILRLTRSIALIRNLVGDYGGTVVNTAGDGLVAVFQDA PKALHFAIEMQRELSRESAWAEAREPIAWRVGISLGETFEGQEGVYGHSVNLAARIQGFADPGGICVTETVYRIVRDNPE LVLRSLGRRRLKNISAPVEIYAAAPASPAAAAAVPLRAVPRRVDPGLPDTSLAILPMENLSADPGDQHLCHGIVADLITN LCRFRHLLVIARHSSFLAAAQTSSLREIGRRLGVRYLMTSSFRRAGNRLRITVELVEAESENTIWSERYDGVMLDIFDFQ DDVTAMTAARVAIQLDANERRRLAEQSHPALYAYGLVLRGQDMGLRFLPDANLHARRLFEEARDLDPDYGRSYAAMSRTF NVEWRYNWTSNPDAALNQALVLAKRAVQCDALDSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAY VRQGERAVQLLERAMRLNPYFPDAYLWFLGDAYFHHGDYGKTIETLSRMRDQSEAHRLLAASHALLGQMDEARRHAGAVM RVHPNFTIAHWRKVPPLKHAEDLELYVEGLRKAGLT
Sequences:
>Translated_596_residues MPERSLGRAMIAQPGLTGPRLQAVLYADIHGYTRLIEQDEAGTILRLTRSIALIRNLVGDYGGTVVNTAGDGLVAVFQDA PKALHFAIEMQRELSRESAWAEAREPIAWRVGISLGETFEGQEGVYGHSVNLAARIQGFADPGGICVTETVYRIVRDNPE LVLRSLGRRRLKNISAPVEIYAAAPASPAAAAAVPLRAVPRRVDPGLPDTSLAILPMENLSADPGDQHLCHGIVADLITN LCRFRHLLVIARHSSFLAAAQTSSLREIGRRLGVRYLMTSSFRRAGNRLRITVELVEAESENTIWSERYDGVMLDIFDFQ DDVTAMTAARVAIQLDANERRRLAEQSHPALYAYGLVLRGQDMGLRFLPDANLHARRLFEEARDLDPDYGRSYAAMSRTF NVEWRYNWTSNPDAALNQALVLAKRAVQCDALDSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAY VRQGERAVQLLERAMRLNPYFPDAYLWFLGDAYFHHGDYGKTIETLSRMRDQSEAHRLLAASHALLGQMDEARRHAGAVM RVHPNFTIAHWRKVPPLKHAEDLELYVEGLRKAGLT >Mature_595_residues PERSLGRAMIAQPGLTGPRLQAVLYADIHGYTRLIEQDEAGTILRLTRSIALIRNLVGDYGGTVVNTAGDGLVAVFQDAP KALHFAIEMQRELSRESAWAEAREPIAWRVGISLGETFEGQEGVYGHSVNLAARIQGFADPGGICVTETVYRIVRDNPEL VLRSLGRRRLKNISAPVEIYAAAPASPAAAAAVPLRAVPRRVDPGLPDTSLAILPMENLSADPGDQHLCHGIVADLITNL CRFRHLLVIARHSSFLAAAQTSSLREIGRRLGVRYLMTSSFRRAGNRLRITVELVEAESENTIWSERYDGVMLDIFDFQD DVTAMTAARVAIQLDANERRRLAEQSHPALYAYGLVLRGQDMGLRFLPDANLHARRLFEEARDLDPDYGRSYAAMSRTFN VEWRYNWTSNPDAALNQALVLAKRAVQCDALDSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAYV RQGERAVQLLERAMRLNPYFPDAYLWFLGDAYFHHGDYGKTIETLSRMRDQSEAHRLLAASHALLGQMDEARRHAGAVMR VHPNFTIAHWRKVPPLKHAEDLELYVEGLRKAGLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 66390; Mature: 66259
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERSLGRAMIAQPGLTGPRLQAVLYADIHGYTRLIEQDEAGTILRLTRSIALIRNLVGD CCCHHHCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH YGGTVVNTAGDGLVAVFQDAPKALHFAIEMQRELSRESAWAEAREPIAWRVGISLGETFE CCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC GQEGVYGHSVNLAARIQGFADPGGICVTETVYRIVRDNPELVLRSLGRRRLKNISAPVEI CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEE YAAAPASPAAAAAVPLRAVPRRVDPGLPDTSLAILPMENLSADPGDQHLCHGIVADLITN EEECCCCCCHHHHCCHHHCCCCCCCCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHH LCRFRHLLVIARHSSFLAAAQTSSLREIGRRLGVRYLMTSSFRRAGNRLRITVELVEAES HHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEEEEECCC ENTIWSERYDGVMLDIFDFQDDVTAMTAARVAIQLDANERRRLAEQSHPALYAYGLVLRG CCCCHHHHCCCEEEEEECCCCHHHHHHHEEEEEEECCHHHHHHHHHCCCEEEEEEEEEEC QDMGLRFLPDANLHARRLFEEARDLDPDYGRSYAAMSRTFNVEWRYNWTSNPDAALNQAL CCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEEECCCCCCHHHHHHHH VLAKRAVQCDALDSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECHHHHHH VRQGERAVQLLERAMRLNPYFPDAYLWFLGDAYFHHGDYGKTIETLSRMRDQSEAHRLLA HHCCHHHHHHHHHHHHCCCCCCCHHHEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ASHALLGQMDEARRHAGAVMRVHPNFTIAHWRKVPPLKHAEDLELYVEGLRKAGLT HHHHHHHHHHHHHHHCCCEEEECCCEEEEHHCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PERSLGRAMIAQPGLTGPRLQAVLYADIHGYTRLIEQDEAGTILRLTRSIALIRNLVGD CCHHHCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH YGGTVVNTAGDGLVAVFQDAPKALHFAIEMQRELSRESAWAEAREPIAWRVGISLGETFE CCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC GQEGVYGHSVNLAARIQGFADPGGICVTETVYRIVRDNPELVLRSLGRRRLKNISAPVEI CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEE YAAAPASPAAAAAVPLRAVPRRVDPGLPDTSLAILPMENLSADPGDQHLCHGIVADLITN EEECCCCCCHHHHCCHHHCCCCCCCCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHH LCRFRHLLVIARHSSFLAAAQTSSLREIGRRLGVRYLMTSSFRRAGNRLRITVELVEAES HHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEEEEECCC ENTIWSERYDGVMLDIFDFQDDVTAMTAARVAIQLDANERRRLAEQSHPALYAYGLVLRG CCCCHHHHCCCEEEEEECCCCHHHHHHHEEEEEEECCHHHHHHHHHCCCEEEEEEEEEEC QDMGLRFLPDANLHARRLFEEARDLDPDYGRSYAAMSRTFNVEWRYNWTSNPDAALNQAL CCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEEECCCCCCHHHHHHHH VLAKRAVQCDALDSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECHHHHHH VRQGERAVQLLERAMRLNPYFPDAYLWFLGDAYFHHGDYGKTIETLSRMRDQSEAHRLLA HHCCHHHHHHHHHHHHCCCCCCCHHHEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ASHALLGQMDEARRHAGAVMRVHPNFTIAHWRKVPPLKHAEDLELYVEGLRKAGLT HHHHHHHHHHHHHHHCCCEEEECCCEEEEHHCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]