Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357423
Identifier: 119357423
GI number: 119357423
Start: 1844441
End: 1844848
Strand: Direct
Name: 119357423
Synonym: Cpha266_1622
Alternate gene names: NA
Gene position: 1844441-1844848 (Clockwise)
Preceding gene: 119357421
Following gene: 119357429
Centisome position: 58.85
GC content: 54.66
Gene sequence:
>408_bases ATGGCCATTACAGGACAATACAGGGAAGAAGCTCTCCGGCTCCGCGAAGAGGTCAAAAAGAAATTCAATACTCAGGTAGC CCTCTGCAAAGCCATCGGAACCAGCGACGCAACTTACCTCAGCGCATACGTCAGCGGCAAAAACCGAATCGGCAACATCC TCCGCGAAAGACTCGAAGCCGTCGGCATCGACGTCGGGTATGTGCTCTATGGAAAACGCGGATTCTCACCCGTCCCTGCC GGACCCGATCCCGAAGTCATGGCCAAACTGCACGAATGCACCGACAAACTCCGTGCTCTGCAGAACACCGTCATCGACCT CCAGAAAGAGCTGCTCGATGTCAATAGAATGCTCGAAGACATCACCGGCACACTCAATCCGGCATCCACTACAACACCCG CCGCATAA
Upstream 100 bases:
>100_bases ATCATTATCTTTGCTTATCTTTCGTAATCTTTTCCTATCTTTATCATAATAAATAGATAGATATATCTATTATTGCCAAT ATACACTATTTCAACAACAT
Downstream 100 bases:
>100_bases TGCCGCTTATCTCGTACTGTTCCACCGGACACCCGGACTCGGCATTCATGCGCCCTATCCGATCCGCAACATCCGGAACA CCCTCATCCCGCATCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAITGQYREEALRLREEVKKKFNTQVALCKAIGTSDATYLSAYVSGKNRIGNILRERLEAVGIDVGYVLYGKRGFSPVPA GPDPEVMAKLHECTDKLRALQNTVIDLQKELLDVNRMLEDITGTLNPASTTTPAA
Sequences:
>Translated_135_residues MAITGQYREEALRLREEVKKKFNTQVALCKAIGTSDATYLSAYVSGKNRIGNILRERLEAVGIDVGYVLYGKRGFSPVPA GPDPEVMAKLHECTDKLRALQNTVIDLQKELLDVNRMLEDITGTLNPASTTTPAA >Mature_134_residues AITGQYREEALRLREEVKKKFNTQVALCKAIGTSDATYLSAYVSGKNRIGNILRERLEAVGIDVGYVLYGKRGFSPVPAG PDPEVMAKLHECTDKLRALQNTVIDLQKELLDVNRMLEDITGTLNPASTTTPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14824; Mature: 14693
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITGQYREEALRLREEVKKKFNTQVALCKAIGTSDATYLSAYVSGKNRIGNILRERLEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH VGIDVGYVLYGKRGFSPVPAGPDPEVMAKLHECTDKLRALQNTVIDLQKELLDVNRMLED HCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGTLNPASTTTPAA HHCCCCCCCCCCCCC >Mature Secondary Structure AITGQYREEALRLREEVKKKFNTQVALCKAIGTSDATYLSAYVSGKNRIGNILRERLEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH VGIDVGYVLYGKRGFSPVPAGPDPEVMAKLHECTDKLRALQNTVIDLQKELLDVNRMLED HCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGTLNPASTTTPAA HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA