Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357421
Identifier: 119357421
GI number: 119357421
Start: 1842769
End: 1843758
Strand: Direct
Name: 119357421
Synonym: Cpha266_1620
Alternate gene names: NA
Gene position: 1842769-1843758 (Clockwise)
Preceding gene: 119357420
Following gene: 119357423
Centisome position: 58.8
GC content: 47.78
Gene sequence:
>990_bases ATGGAAAAGCATAACTTTATGAAGTACATCGCAATTCTTGGCACGATTATTTTCGGATTGTCTGTTACGTTTGCTTGGTC TGCTGAACCTGATCATTTCCGTCAGTACCGCTATCCAGACGATGGATTCGAAGTGGCATTTCCTCAAAAGCCGCTTGAAT TTAGAACAGACAGAGGCCCAGATCACGGGCACGTAAATTCCTACCAAGCGGTTGTCGTCAATCCAGTTTCACAGTACTCA GTGTTCATCAGTCATTCACCCAAAAGGGTGTTTGAAGATGCTGCGATAGATGCATATCTGGAAGGTATTGTTCGCGGCCT AACCACGGCATCGGATGACGCCGTATTGAAATACAAGAGGAGAACTACGTTTCTCGGCTTCCCTGCTATCGAATATCAAT ACACACACAAGATCGAAGGGGTACCCGTCATTGGGCGCGGGATGGTTCTCTTAGTAGATGGAGAACATATTCGACTATCT CAGATATACGCCACAAATGACAGTAATGCAGAAAGCAATTTTAAAAAATTCGTCGGGTCGTTCCGGCTAATGTCGATTGA CCGTGCTTTGAGTAAACATCGCTTCGATGAGCGTGCACGAAGCATCTCTTTTTCACCTCCGGATGGCTGGAAACAAGGCA CACCGAAGTTCGCGCAGGTGGCTGCCATCTTTACGAACCCAGGCGGTCATAGCATCACAGTTCTCGACAGTGGTACGCCT GCGTATGTGTGTGATAACTACAAACGAGAAATACAGACCACACAAGGTGTGCAGTCTACTGGCGAAATATCGGCGCGTGG TCGCCCAGTAACATGGCTAAAGTCAACGGCACACAATCCAGCCGCAGGTATTCGGATGACCAGCGTTCACTATTGCGTGA ATACCATGAAAGGGGCAGTAATCATGATTGGTGCCGCACCCGAGCAGACATTCTTCAGGTCGGAAGTCATGTTTCGCAAT GCTGCAACCTCGATGGAGATTCGTAAGTAA
Upstream 100 bases:
>100_bases GGCGGGCGAACAAGCGGATGGAGCAGACACTCCGCGTCGTCAAATAAATTTTCCGCTGTGGAGCGCTGCTCATCTTCGGC CACGTTAGGTTCTCAATACT
Downstream 100 bases:
>100_bases TGGACGAACCTAACATTGCGGTCGAGAGGGACGCTCCGCAAGCGCGCTTCGCCCGCTCGCTACGCGCCCCTCACCTTAAA CGTTATAACGCAAAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MEKHNFMKYIAILGTIIFGLSVTFAWSAEPDHFRQYRYPDDGFEVAFPQKPLEFRTDRGPDHGHVNSYQAVVVNPVSQYS VFISHSPKRVFEDAAIDAYLEGIVRGLTTASDDAVLKYKRRTTFLGFPAIEYQYTHKIEGVPVIGRGMVLLVDGEHIRLS QIYATNDSNAESNFKKFVGSFRLMSIDRALSKHRFDERARSISFSPPDGWKQGTPKFAQVAAIFTNPGGHSITVLDSGTP AYVCDNYKREIQTTQGVQSTGEISARGRPVTWLKSTAHNPAAGIRMTSVHYCVNTMKGAVIMIGAAPEQTFFRSEVMFRN AATSMEIRK
Sequences:
>Translated_329_residues MEKHNFMKYIAILGTIIFGLSVTFAWSAEPDHFRQYRYPDDGFEVAFPQKPLEFRTDRGPDHGHVNSYQAVVVNPVSQYS VFISHSPKRVFEDAAIDAYLEGIVRGLTTASDDAVLKYKRRTTFLGFPAIEYQYTHKIEGVPVIGRGMVLLVDGEHIRLS QIYATNDSNAESNFKKFVGSFRLMSIDRALSKHRFDERARSISFSPPDGWKQGTPKFAQVAAIFTNPGGHSITVLDSGTP AYVCDNYKREIQTTQGVQSTGEISARGRPVTWLKSTAHNPAAGIRMTSVHYCVNTMKGAVIMIGAAPEQTFFRSEVMFRN AATSMEIRK >Mature_329_residues MEKHNFMKYIAILGTIIFGLSVTFAWSAEPDHFRQYRYPDDGFEVAFPQKPLEFRTDRGPDHGHVNSYQAVVVNPVSQYS VFISHSPKRVFEDAAIDAYLEGIVRGLTTASDDAVLKYKRRTTFLGFPAIEYQYTHKIEGVPVIGRGMVLLVDGEHIRLS QIYATNDSNAESNFKKFVGSFRLMSIDRALSKHRFDERARSISFSPPDGWKQGTPKFAQVAAIFTNPGGHSITVLDSGTP AYVCDNYKREIQTTQGVQSTGEISARGRPVTWLKSTAHNPAAGIRMTSVHYCVNTMKGAVIMIGAAPEQTFFRSEVMFRN AATSMEIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36835; Mature: 36835
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKHNFMKYIAILGTIIFGLSVTFAWSAEPDHFRQYRYPDDGFEVAFPQKPLEFRTDRGP CCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCC DHGHVNSYQAVVVNPVSQYSVFISHSPKRVFEDAAIDAYLEGIVRGLTTASDDAVLKYKR CCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC RTTFLGFPAIEYQYTHKIEGVPVIGRGMVLLVDGEHIRLSQIYATNDSNAESNFKKFVGS CEEEECCCCEEEEEEEEECCCEEECCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHH FRLMSIDRALSKHRFDERARSISFSPPDGWKQGTPKFAQVAAIFTNPGGHSITVLDSGTP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEECCCCCEEEEEECCCC AYVCDNYKREIQTTQGVQSTGEISARGRPVTWLKSTAHNPAAGIRMTSVHYCVNTMKGAV EEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHCCCCCCCCEEEEHHHHHHHCCCCEE IMIGAAPEQTFFRSEVMFRNAATSMEIRK EEEECCCCHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure MEKHNFMKYIAILGTIIFGLSVTFAWSAEPDHFRQYRYPDDGFEVAFPQKPLEFRTDRGP CCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCC DHGHVNSYQAVVVNPVSQYSVFISHSPKRVFEDAAIDAYLEGIVRGLTTASDDAVLKYKR CCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC RTTFLGFPAIEYQYTHKIEGVPVIGRGMVLLVDGEHIRLSQIYATNDSNAESNFKKFVGS CEEEECCCCEEEEEEEEECCCEEECCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHH FRLMSIDRALSKHRFDERARSISFSPPDGWKQGTPKFAQVAAIFTNPGGHSITVLDSGTP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEECCCCCEEEEEECCCC AYVCDNYKREIQTTQGVQSTGEISARGRPVTWLKSTAHNPAAGIRMTSVHYCVNTMKGAV EEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHCCCCCCCCEEEEHHHHHHHCCCCEE IMIGAAPEQTFFRSEVMFRNAATSMEIRK EEEECCCCHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA