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The map label for this gene is yeeS [C]

Identifier: 119357420

GI number: 119357420

Start: 1841776

End: 1842276

Strand: Direct

Name: yeeS [C]

Synonym: Cpha266_1619

Alternate gene names: 119357420

Gene position: 1841776-1842276 (Clockwise)

Preceding gene: 119357419

Following gene: 119357421

Centisome position: 58.77

GC content: 53.69

Gene sequence:

>501_bases
ATGGCAAACACCCTTCCACTCTTCGGCAGCGCTCCGGTAGCATCAGAACCAAAAGTAACCTTCATCCCGCGTTACGGCGT
CCGGCTGGTGCGTGAATCGCAGGTATTGTACGACAACAAAAAGATTACGGTAGCCGCCGATATTTGCAGCATCTGCAACA
CCATCGGCCTGCCCGATCTGCCACATGAAGAACTGCACGTCTTTTTCCTCAGCACAAAAAACTACATCACCGGCACCCAG
CTCGTTTCCCGCGGAACCCTCAACGCATCGCTCATTCATCCGCGCGAGGTTTTCAGAGGCGCCATACTGGCCAATGCGAA
TGCTATTATTCTCGTCCACAACCACCCATCCGGCAACCCCGAACCAAGCAATGCCGATAAACAGGTAACCAAACAAATCC
GCAGCTCAGCCGACATCATCGGCATCGAACTACTCGACCACGTCATCATCGGCAGCAACGGCAACCACTTCAGCTTCAGG
CAAGAAGGGCTCTTCAACTGA

Upstream 100 bases:

>100_bases
TTTGTGCAGCTCACTGTTCCCCCTTGCAGAAAAAGTTTGCCCGTCTTCAGGGAGCCGCTGTCCCCCCGGGGAATGGCTCT
CAAACGCAATCCTTACCACC

Downstream 100 bases:

>100_bases
AACAAAAAAAGCAGGGGCACCCGCCCCTGCTCACCTCCCCAGACACCTCCCGAATCCTCCTCCCACTACCAACCAATCGC
CAAATAATTACGCTATCATC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MANTLPLFGSAPVASEPKVTFIPRYGVRLVRESQVLYDNKKITVAADICSICNTIGLPDLPHEELHVFFLSTKNYITGTQ
LVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFR
QEGLFN

Sequences:

>Translated_166_residues
MANTLPLFGSAPVASEPKVTFIPRYGVRLVRESQVLYDNKKITVAADICSICNTIGLPDLPHEELHVFFLSTKNYITGTQ
LVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFR
QEGLFN
>Mature_165_residues
ANTLPLFGSAPVASEPKVTFIPRYGVRLVRESQVLYDNKKITVAADICSICNTIGLPDLPHEELHVFFLSTKNYITGTQL
VSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQ
EGLFN

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788312, Length=123, Percent_Identity=38.2113821138211, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI87082300, Length=108, Percent_Identity=42.5925925925926, Blast_Score=88, Evalue=2e-19,
Organism=Escherichia coli, GI1788997, Length=154, Percent_Identity=29.8701298701299, Blast_Score=85, Evalue=2e-18,
Organism=Escherichia coli, GI2367100, Length=106, Percent_Identity=38.6792452830189, Blast_Score=83, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18153; Mature: 18022

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTLPLFGSAPVASEPKVTFIPRYGVRLVRESQVLYDNKKITVAADICSICNTIGLPDL
CCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEECCCEEEEHHHHHHHHHHCCCCCC
PHEELHVFFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNP
CCCCEEEEEEECCCCCCHHHHHHCCCCCEEEECHHHHHHHHEEECCCEEEEEECCCCCCC
EPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLFN
CCCCHHHHHHHHHHHCCCEEEHHHHCEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure 
ANTLPLFGSAPVASEPKVTFIPRYGVRLVRESQVLYDNKKITVAADICSICNTIGLPDL
CCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEECCCEEEEHHHHHHHHHHCCCCCC
PHEELHVFFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNP
CCCCEEEEEEECCCCCCHHHHHHCCCCCEEEECHHHHHHHHEEECCCEEEEEECCCCCCC
EPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLFN
CCCCHHHHHHHHHHHCCCEEEHHHHCEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA