Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357419
Identifier: 119357419
GI number: 119357419
Start: 1840159
End: 1840692
Strand: Direct
Name: 119357419
Synonym: Cpha266_1618
Alternate gene names: NA
Gene position: 1840159-1840692 (Clockwise)
Preceding gene: 119357418
Following gene: 119357420
Centisome position: 58.72
GC content: 52.81
Gene sequence:
>534_bases ATGTCGGTAAAAGCATCAAGAAGAAAGGCATGGAAAGAGCCCACCCCTCATGAAGAGCGCGCAAAAGCACGATTCCGCTG TCGCTTCACGCTAAAGCCTCTGCCTGAACAGCTATCGGCATGGAGAGCATCAGCATGCTTGCCCCGGCACACAACGATTG TTCGTACATTCCGCAAAGGCTGCGAGTGCACCACGGCAGCAAAGCAAAAGAGCAGCCGTGACGCCACCCGCAGCCCTTGC TTCAGTCACTCCGAAACACCAATACAACAGGTCATCGCAGAAGGTTCGACTACAAACCCTCTGCAACAAAAGCACATCTA CGCGCTGCGCTTGTCATGTAACATACCGCCCGGCTCTCTGCATTCAGTCACGCCTTACGCTCCGCTTCGCTACACTTTGA GGCAAAAGCCGCGCCTTCATGCACCGCAGGGCGATGATCGGTCACGTTCTATCAATCTGTCTGGTGTTAATCGGGGTCGT TGCATAACTAAAATTATGTACAAGCCTCCGGAAGCTGAGTACAGCTTTACATAA
Upstream 100 bases:
>100_bases GCTGGCCTGCACTGCCCTCACATCCCGTTCCAACCCCCTCGCCCGGATGGCTGACTTGCTCCGCGGGCTACGCAAGTCAC CCCCGTAGCAGCTTTGTGGC
Downstream 100 bases:
>100_bases TCAGAGTTATGCAAGCAACCATAGGGCGGGCCACCGCATCTTTGGCGGCTGGTCTTTTCCCGTTTCGTAGCATCACGCCA ATCAACAACCACGCTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSVKASRRKAWKEPTPHEERAKARFRCRFTLKPLPEQLSAWRASACLPRHTTIVRTFRKGCECTTAAKQKSSRDATRSPC FSHSETPIQQVIAEGSTTNPLQQKHIYALRLSCNIPPGSLHSVTPYAPLRYTLRQKPRLHAPQGDDRSRSINLSGVNRGR CITKIMYKPPEAEYSFT
Sequences:
>Translated_177_residues MSVKASRRKAWKEPTPHEERAKARFRCRFTLKPLPEQLSAWRASACLPRHTTIVRTFRKGCECTTAAKQKSSRDATRSPC FSHSETPIQQVIAEGSTTNPLQQKHIYALRLSCNIPPGSLHSVTPYAPLRYTLRQKPRLHAPQGDDRSRSINLSGVNRGR CITKIMYKPPEAEYSFT >Mature_176_residues SVKASRRKAWKEPTPHEERAKARFRCRFTLKPLPEQLSAWRASACLPRHTTIVRTFRKGCECTTAAKQKSSRDATRSPCF SHSETPIQQVIAEGSTTNPLQQKHIYALRLSCNIPPGSLHSVTPYAPLRYTLRQKPRLHAPQGDDRSRSINLSGVNRGRC ITKIMYKPPEAEYSFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20118; Mature: 19987
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKASRRKAWKEPTPHEERAKARFRCRFTLKPLPEQLSAWRASACLPRHTTIVRTFRKG CCCCCCHHHHCCCCCCHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHC CECTTAAKQKSSRDATRSPCFSHSETPIQQVIAEGSTTNPLQQKHIYALRLSCNIPPGSL CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHEEEEEEEECCCCCCCC HSVTPYAPLRYTLRQKPRLHAPQGDDRSRSINLSGVNRGRCITKIMYKPPEAEYSFT CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure SVKASRRKAWKEPTPHEERAKARFRCRFTLKPLPEQLSAWRASACLPRHTTIVRTFRKG CCCCCHHHHCCCCCCHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHC CECTTAAKQKSSRDATRSPCFSHSETPIQQVIAEGSTTNPLQQKHIYALRLSCNIPPGSL CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHEEEEEEEECCCCCCCC HSVTPYAPLRYTLRQKPRLHAPQGDDRSRSINLSGVNRGRCITKIMYKPPEAEYSFT CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA