Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357284
Identifier: 119357284
GI number: 119357284
Start: 1674997
End: 1675503
Strand: Direct
Name: 119357284
Synonym: Cpha266_1477
Alternate gene names: NA
Gene position: 1674997-1675503 (Clockwise)
Preceding gene: 119357279
Following gene: 119357285
Centisome position: 53.45
GC content: 53.25
Gene sequence:
>507_bases ATGAGCGTCCCAATCTCCATATTCATTGCCTGTATAAGAGGGACTGACGGCAGGTTATTACTGCTGCTTGGCGAAAGAGG AGGCTCGCAAAAATTTCCGGAGGGGGTTATTCGATGGGGCGTTCTTGATATCGAGCGCCATGAGCTGCAGTTCACCGAAA AGGGGCTTGAGGGCGTAAAAATCAACGCTCCCGGCAAATGGAAAAACAGACTCACGAACCGCGATATCAGCGACATGTAT ATCTCGCCTGAAGGCATAATCTGGCTATCGGCCGCAGAAGACAACGGAGATAACGGACCGTTCACTTCGGTGATCTACTC TCCGGGCAGGATTTCCGGAAATTTCAGCCAGCCTGTTATTGCCGACCGGCATCCTGAAGTCTGGAGAGCTGTCGCTTCTG TAAAGATCGAGGCGCTGAGCGGGCCTGTCGAATCTGTCGCAGGTAGCCGGATGAGCATCGGCAGCGACGACGAGAATTAT GGCGGCATTTGGCGGCCTGTGGAATAA
Upstream 100 bases:
>100_bases TCCTCTCGGCATTGATGTTCGTTGTTATGGTTTTGATCCTGTCTGCAGCAAAGCGTTACTTCTGCAAAGTAAGAATTTTA TTGCGCTTGTTTACGTAGTT
Downstream 100 bases:
>100_bases TCGGTTGAAAACAGCATGGCTTTGCAGGTTTCGGAGCAGCGGCCCGGACTCCTCCATTCCTGTTTGACTCCAAAGCAAAC ACCGGTGGAACAACGCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSVPISIFIACIRGTDGRLLLLLGERGGSQKFPEGVIRWGVLDIERHELQFTEKGLEGVKINAPGKWKNRLTNRDISDMY ISPEGIIWLSAAEDNGDNGPFTSVIYSPGRISGNFSQPVIADRHPEVWRAVASVKIEALSGPVESVAGSRMSIGSDDENY GGIWRPVE
Sequences:
>Translated_168_residues MSVPISIFIACIRGTDGRLLLLLGERGGSQKFPEGVIRWGVLDIERHELQFTEKGLEGVKINAPGKWKNRLTNRDISDMY ISPEGIIWLSAAEDNGDNGPFTSVIYSPGRISGNFSQPVIADRHPEVWRAVASVKIEALSGPVESVAGSRMSIGSDDENY GGIWRPVE >Mature_167_residues SVPISIFIACIRGTDGRLLLLLGERGGSQKFPEGVIRWGVLDIERHELQFTEKGLEGVKINAPGKWKNRLTNRDISDMYI SPEGIIWLSAAEDNGDNGPFTSVIYSPGRISGNFSQPVIADRHPEVWRAVASVKIEALSGPVESVAGSRMSIGSDDENYG GIWRPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18394; Mature: 18263
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPISIFIACIRGTDGRLLLLLGERGGSQKFPEGVIRWGVLDIERHELQFTEKGLEGVK CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHEECEEEEEHHHHHHHHCCCCEEE INAPGKWKNRLTNRDISDMYISPEGIIWLSAAEDNGDNGPFTSVIYSPGRISGNFSQPVI EECCCCHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC ADRHPEVWRAVASVKIEALSGPVESVAGSRMSIGSDDENYGGIWRPVE CCCCHHHHHHHHHEEEEECCCCHHHHCCCEEECCCCCCCCCCEEECCC >Mature Secondary Structure SVPISIFIACIRGTDGRLLLLLGERGGSQKFPEGVIRWGVLDIERHELQFTEKGLEGVK CCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHEECEEEEEHHHHHHHHCCCCEEE INAPGKWKNRLTNRDISDMYISPEGIIWLSAAEDNGDNGPFTSVIYSPGRISGNFSQPVI EECCCCHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC ADRHPEVWRAVASVKIEALSGPVESVAGSRMSIGSDDENYGGIWRPVE CCCCHHHHHHHHHEEEEECCCCHHHHCCCEEECCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA