Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357279
Identifier: 119357279
GI number: 119357279
Start: 1670297
End: 1671316
Strand: Direct
Name: 119357279
Synonym: Cpha266_1472
Alternate gene names: NA
Gene position: 1670297-1671316 (Clockwise)
Preceding gene: 119357268
Following gene: 119357284
Centisome position: 53.3
GC content: 51.47
Gene sequence:
>1020_bases ATGATCAACGGAAATACTTATCACGCCCTTCCCTGCCCCTGCGGAAGCGGAAAACCGTTTGACGAGTGCTGCTTCAGACC GAACAACCAGAAAGCCGGTAATCCAATGGATGAGGTTATGCGGGCGATTCATGAGGCCCAACAAAGCCGGGAGTTCAGCT CCATCAAGGATGCCGAACAGTTTATGCATGAATTCATGATCCAGCAGAACACAGCGCCTCGCGATGAATTTGCAGGATTA TCGCCAACAGAAATGCGCAGTATCCTCTCGACCCCTTTTGATGCCGGTGAAGTTGCAACCTTTGTAGACGTTCTTCCGCA GGAGCCGGACTGCCCCGCAGCAGCACTGTTCAAAGCGCTTGCTGACGCGATCGGCGACAAGGGACTCAAGCCCACAGCAA CAGGCAATCTGCCAAGGAATACCGTTCGCGAAATTTCAATAGCCACCAACGGCACCGATACCTTCGGGACCGAACACTCA CGATACCAGCTACAGAAAGAGGCCGATTATATCGATCTGCACATAACACGACTTATAGCAGGTCTTGCAGGCCTCATCAG AAAATACAAGGGCCGGTTTATCCTGACGAAAAAGTGCCGGGCTCTCCTTGACAGGCATGGCATGGCCGGAATCTGGCCGG AGCTTTTCAGGGCTTATGCAGAAAAGTATAACTGGGCCTATAGTGACGGATACGGTGAGCTCTATTTCATGCAGCGTTCG TTTCTCTATACGCTCTACCTGCTGCACCGGTTCGGCTCGGAAGAACGTGACGGACTGTTTTATGCAAATGCCTATTTCAA AGCGTTTCCGACATTTTACGACGAGATTCCTCTGCGGTACGCCACGAGTTCGGAAGAGATCGCAATATCCTCGTATCTGC ACCGGGTAATTGACCGGTTCGCAGGATTCTTCGGACTTGCACATGTCGAGAAAACCGATTGGAAGTTTGGCGTCGACAGA ATCTACAAGGTTCGGGCACTGCCGCTTCTGGAAGATGCGATTCGATTTCATGTGCCATAA
Upstream 100 bases:
>100_bases TGCTTGTAACGGTTTTTCCTTACATTTCATGTGAAATCCGCCGAACATCGTGTAGTTTTTTCCTTCACGACCAGTTTGAA TAGTTCTACCATCAAGGAAT
Downstream 100 bases:
>100_bases TACGCCGGCAGGATTTCAGAAAACCTCAACCGTATAGAAAACACTCTGATGAAAAGGGGGAGTTTGCCCACGAATGAACA CGAATTTGCACGAAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MINGNTYHALPCPCGSGKPFDECCFRPNNQKAGNPMDEVMRAIHEAQQSREFSSIKDAEQFMHEFMIQQNTAPRDEFAGL SPTEMRSILSTPFDAGEVATFVDVLPQEPDCPAAALFKALADAIGDKGLKPTATGNLPRNTVREISIATNGTDTFGTEHS RYQLQKEADYIDLHITRLIAGLAGLIRKYKGRFILTKKCRALLDRHGMAGIWPELFRAYAEKYNWAYSDGYGELYFMQRS FLYTLYLLHRFGSEERDGLFYANAYFKAFPTFYDEIPLRYATSSEEIAISSYLHRVIDRFAGFFGLAHVEKTDWKFGVDR IYKVRALPLLEDAIRFHVP
Sequences:
>Translated_339_residues MINGNTYHALPCPCGSGKPFDECCFRPNNQKAGNPMDEVMRAIHEAQQSREFSSIKDAEQFMHEFMIQQNTAPRDEFAGL SPTEMRSILSTPFDAGEVATFVDVLPQEPDCPAAALFKALADAIGDKGLKPTATGNLPRNTVREISIATNGTDTFGTEHS RYQLQKEADYIDLHITRLIAGLAGLIRKYKGRFILTKKCRALLDRHGMAGIWPELFRAYAEKYNWAYSDGYGELYFMQRS FLYTLYLLHRFGSEERDGLFYANAYFKAFPTFYDEIPLRYATSSEEIAISSYLHRVIDRFAGFFGLAHVEKTDWKFGVDR IYKVRALPLLEDAIRFHVP >Mature_339_residues MINGNTYHALPCPCGSGKPFDECCFRPNNQKAGNPMDEVMRAIHEAQQSREFSSIKDAEQFMHEFMIQQNTAPRDEFAGL SPTEMRSILSTPFDAGEVATFVDVLPQEPDCPAAALFKALADAIGDKGLKPTATGNLPRNTVREISIATNGTDTFGTEHS RYQLQKEADYIDLHITRLIAGLAGLIRKYKGRFILTKKCRALLDRHGMAGIWPELFRAYAEKYNWAYSDGYGELYFMQRS FLYTLYLLHRFGSEERDGLFYANAYFKAFPTFYDEIPLRYATSSEEIAISSYLHRVIDRFAGFFGLAHVEKTDWKFGVDR IYKVRALPLLEDAIRFHVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38600; Mature: 38600
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGNTYHALPCPCGSGKPFDECCFRPNNQKAGNPMDEVMRAIHEAQQSREFSSIKDAEQ CCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FMHEFMIQQNTAPRDEFAGLSPTEMRSILSTPFDAGEVATFVDVLPQEPDCPAAALFKAL HHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH ADAIGDKGLKPTATGNLPRNTVREISIATNGTDTFGTEHSRYQLQKEADYIDLHITRLIA HHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH GLAGLIRKYKGRFILTKKCRALLDRHGMAGIWPELFRAYAEKYNWAYSDGYGELYFMQRS HHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCEEHHHHHH FLYTLYLLHRFGSEERDGLFYANAYFKAFPTFYDEIPLRYATSSEEIAISSYLHRVIDRF HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH AGFFGLAHVEKTDWKFGVDRIYKVRALPLLEDAIRFHVP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MINGNTYHALPCPCGSGKPFDECCFRPNNQKAGNPMDEVMRAIHEAQQSREFSSIKDAEQ CCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FMHEFMIQQNTAPRDEFAGLSPTEMRSILSTPFDAGEVATFVDVLPQEPDCPAAALFKAL HHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH ADAIGDKGLKPTATGNLPRNTVREISIATNGTDTFGTEHSRYQLQKEADYIDLHITRLIA HHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH GLAGLIRKYKGRFILTKKCRALLDRHGMAGIWPELFRAYAEKYNWAYSDGYGELYFMQRS HHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCEEHHHHHH FLYTLYLLHRFGSEERDGLFYANAYFKAFPTFYDEIPLRYATSSEEIAISSYLHRVIDRF HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH AGFFGLAHVEKTDWKFGVDRIYKVRALPLLEDAIRFHVP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA