Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357285
Identifier: 119357285
GI number: 119357285
Start: 1675786
End: 1676220
Strand: Direct
Name: 119357285
Synonym: Cpha266_1478
Alternate gene names: NA
Gene position: 1675786-1676220 (Clockwise)
Preceding gene: 119357284
Following gene: 119357286
Centisome position: 53.47
GC content: 44.37
Gene sequence:
>435_bases ATGAAGAAGTACAAAGTCACCCTAACACAAGAAGAACGGAAAGAACTTGATGCTCTCAGCAGCAGAGGAAAGCACGCAGC TCAAACGGCTTTGAACTCCTTGATTTTACTCGCTTGTGATGAAGGCAAATACCAGAAAGAACGGTCTATCAATGAAACCA TTGCACGAGTTCTGAATGTCAGCATGAAAACGATAGACCGTGTTAAAAAGCGATTTGTAGAAGAGGGCATCGACATGGTA CTTACCGGCAAACCCTCAACCCGTGTATATAAGCGAAAAGCCGATGGCGACCTTGAAGCACATCTGATAGCAATGAGCTG TTCTGAAGTTCCGAAAGATCATAAGCGATGGACACTGAGATTACTGGCCGACAAGGCAGTTGAACTGAACTATGTTGAAG ATATTTCCTACGAGAGACCATTCGTCGGGTGTTAA
Upstream 100 bases:
>100_bases TTCAATTTTTTCTCCAGCAAATATAGTGTCACGTCACGCATAGAAAGTCGTATGAATAGGTGTATATTTTTCTTCATAAA CAACCAAAAAAGGATTGAAT
Downstream 100 bases:
>100_bases AAAAAACGTCCTTAAGCCCTGGAAGCAAGAAGGATGGGTGATTCCTCCACTCAGTGATGGTGATTTTGTAGCACACATGG AGATGGTTCTTGACGTGTAC
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNVSMKTIDRVKKRFVEEGIDMV LTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLRLLADKAVELNYVEDISYERPFVGC
Sequences:
>Translated_144_residues MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNVSMKTIDRVKKRFVEEGIDMV LTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLRLLADKAVELNYVEDISYERPFVGC >Mature_144_residues MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNVSMKTIDRVKKRFVEEGIDMV LTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLRLLADKAVELNYVEDISYERPFVGC
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16472; Mature: 16472
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNV CCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHH SMKTIDRVKKRFVEEGIDMVLTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLR HHHHHHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCCHHHHEEECHHHCCCHHHHHHHH LLADKAVELNYVEDISYERPFVGC HHHHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNV CCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHH SMKTIDRVKKRFVEEGIDMVLTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLR HHHHHHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCCHHHHEEECHHHCCCHHHHHHHH LLADKAVELNYVEDISYERPFVGC HHHHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA