Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357285

Identifier: 119357285

GI number: 119357285

Start: 1675786

End: 1676220

Strand: Direct

Name: 119357285

Synonym: Cpha266_1478

Alternate gene names: NA

Gene position: 1675786-1676220 (Clockwise)

Preceding gene: 119357284

Following gene: 119357286

Centisome position: 53.47

GC content: 44.37

Gene sequence:

>435_bases
ATGAAGAAGTACAAAGTCACCCTAACACAAGAAGAACGGAAAGAACTTGATGCTCTCAGCAGCAGAGGAAAGCACGCAGC
TCAAACGGCTTTGAACTCCTTGATTTTACTCGCTTGTGATGAAGGCAAATACCAGAAAGAACGGTCTATCAATGAAACCA
TTGCACGAGTTCTGAATGTCAGCATGAAAACGATAGACCGTGTTAAAAAGCGATTTGTAGAAGAGGGCATCGACATGGTA
CTTACCGGCAAACCCTCAACCCGTGTATATAAGCGAAAAGCCGATGGCGACCTTGAAGCACATCTGATAGCAATGAGCTG
TTCTGAAGTTCCGAAAGATCATAAGCGATGGACACTGAGATTACTGGCCGACAAGGCAGTTGAACTGAACTATGTTGAAG
ATATTTCCTACGAGAGACCATTCGTCGGGTGTTAA

Upstream 100 bases:

>100_bases
TTCAATTTTTTCTCCAGCAAATATAGTGTCACGTCACGCATAGAAAGTCGTATGAATAGGTGTATATTTTTCTTCATAAA
CAACCAAAAAAGGATTGAAT

Downstream 100 bases:

>100_bases
AAAAAACGTCCTTAAGCCCTGGAAGCAAGAAGGATGGGTGATTCCTCCACTCAGTGATGGTGATTTTGTAGCACACATGG
AGATGGTTCTTGACGTGTAC

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNVSMKTIDRVKKRFVEEGIDMV
LTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLRLLADKAVELNYVEDISYERPFVGC

Sequences:

>Translated_144_residues
MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNVSMKTIDRVKKRFVEEGIDMV
LTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLRLLADKAVELNYVEDISYERPFVGC
>Mature_144_residues
MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNVSMKTIDRVKKRFVEEGIDMV
LTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLRLLADKAVELNYVEDISYERPFVGC

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16472; Mature: 16472

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNV
CCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHH
SMKTIDRVKKRFVEEGIDMVLTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLR
HHHHHHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCCHHHHEEECHHHCCCHHHHHHHH
LLADKAVELNYVEDISYERPFVGC
HHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKYKVTLTQEERKELDALSSRGKHAAQTALNSLILLACDEGKYQKERSINETIARVLNV
CCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHH
SMKTIDRVKKRFVEEGIDMVLTGKPSTRVYKRKADGDLEAHLIAMSCSEVPKDHKRWTLR
HHHHHHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCCHHHHEEECHHHCCCHHHHHHHH
LLADKAVELNYVEDISYERPFVGC
HHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA