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The map label for this gene is ybaB [C]

Identifier: 119356988

GI number: 119356988

Start: 1321159

End: 1321494

Strand: Direct

Name: ybaB [C]

Synonym: Cpha266_1171

Alternate gene names: 119356988

Gene position: 1321159-1321494 (Clockwise)

Preceding gene: 119356987

Following gene: 119356989

Centisome position: 42.16

GC content: 47.92

Gene sequence:

>336_bases
ATGGGAATGCCGAATTTAGGCGATATGATGAAACAGATCCAGCAGGCAGGCGAGAAGATGCAGGATGTGCAGAAACAGCT
TGAAAAAATTGTTGCTTATGGCGAGGCTGGTGGCGGCATGGTGAAAGTAAGCGTGAACGGCAAACAAAAGCTGCTCACGC
TTCAGATCGATCCGGATATCATGGATGATGCGGAAATGGTACAGGATCTTGTTATAGCGGCAGTGAACAGCGCGCTTGAC
GAAGCTGCAAAAGTCGCGCAGGAGGAGCTGGTAAAAGTCACCGGAGGTATGATGAATCCGGCAGATATTCTGAAAAATCT
GAATCTCGGAAAATAA

Upstream 100 bases:

>100_bases
TCGATAAAATCTATATCGCGTTACGCAGAAAGTAAACTTTGCTCCGAAAAGAACGGAAAAAGAGGATATTTTCTTCAATA
AACAAAGGAGAGCAAAAGCG

Downstream 100 bases:

>100_bases
AGGGCAATGCGTTATACCTCGGGTGCAATTGAAACCCTGATTGACGAATTTGCCAGACTGCCGGGCATTGGACGCAAGAC
CGCCCAGCGTCTCTGCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MGMPNLGDMMKQIQQAGEKMQDVQKQLEKIVAYGEAGGGMVKVSVNGKQKLLTLQIDPDIMDDAEMVQDLVIAAVNSALD
EAAKVAQEELVKVTGGMMNPADILKNLNLGK

Sequences:

>Translated_111_residues
MGMPNLGDMMKQIQQAGEKMQDVQKQLEKIVAYGEAGGGMVKVSVNGKQKLLTLQIDPDIMDDAEMVQDLVIAAVNSALD
EAAKVAQEELVKVTGGMMNPADILKNLNLGK
>Mature_110_residues
GMPNLGDMMKQIQQAGEKMQDVQKQLEKIVAYGEAGGGMVKVSVNGKQKLLTLQIDPDIMDDAEMVQDLVIAAVNSALDE
AAKVAQEELVKVTGGMMNPADILKNLNLGK

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=101, Percent_Identity=40.5940594059406, Blast_Score=79, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1171_CHLPD (A1BFN1)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_911632.1
- ProteinModelPortal:   A1BFN1
- SMR:   A1BFN1
- STRING:   A1BFN1
- GeneID:   4570748
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_1171
- NMPDR:   fig|290317.7.peg.1243
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MEEMIQA
- ProtClustDB:   PRK14621
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11900; Mature: 11769

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMPNLGDMMKQIQQAGEKMQDVQKQLEKIVAYGEAGGGMVKVSVNGKQKLLTLQIDPDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCC
MDDAEMVQDLVIAAVNSALDEAAKVAQEELVKVTGGMMNPADILKNLNLGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
GMPNLGDMMKQIQQAGEKMQDVQKQLEKIVAYGEAGGGMVKVSVNGKQKLLTLQIDPDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCC
MDDAEMVQDLVIAAVNSALDEAAKVAQEELVKVTGGMMNPADILKNLNLGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA