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The map label for this gene is recR

Identifier: 119356989

GI number: 119356989

Start: 1321501

End: 1322118

Strand: Direct

Name: recR

Synonym: Cpha266_1172

Alternate gene names: 119356989

Gene position: 1321501-1322118 (Clockwise)

Preceding gene: 119356988

Following gene: 119356990

Centisome position: 42.17

GC content: 52.27

Gene sequence:

>618_bases
ATGCGTTATACCTCGGGTGCAATTGAAACCCTGATTGACGAATTTGCCAGACTGCCGGGCATTGGACGCAAGACCGCCCA
GCGTCTCTGCATGCATATGCTCAATGAACCGAGAACCGCGGCCGAAAAACTTGCAAAAGCCCTTCTTGATGTCAAGGACA
GGGTTATTCGGTGCAGCGAGTGCCAGAACGTAACCGACAGGGATAGTGATCCCTGTGTTCTCTGCCGAAGCAGCGGTCGG
GACAGAACGGTTATTTGCGTTGTTGAGTCACCTGTAGATCTTCTTGCTTTTGAAAAAACAGGCCATTACAAGGGTCTGTA
CCACGTTCTGCACGGGGTAATTTCTCCTCTTGACGGAATCGGGCCGGATGATATCAAGGTTCGTGAACTGCTTGCAAGGG
TGTCCCGACCTGAAGAGAGCCTTCAGGTAAGGGAGGTTGTGCTTGCTCTCAATCCGACCGTTGAAGGAGAAACGACATCA
CTGTATATCAGCAGACTTCTCAAGCCGCTCGGCATCGCTGTTTCAAAAATAGCGAGGGGTATTCCTGTTGGAGCCGAGCT
TGAGTTTATTGACGAGGCAACGCTTTCCCGCGCGATGGAAGGCCGGTCGGCCATGTAG

Upstream 100 bases:

>100_bases
AGCTGCAAAAGTCGCGCAGGAGGAGCTGGTAAAAGTCACCGGAGGTATGATGAATCCGGCAGATATTCTGAAAAATCTGA
ATCTCGGAAAATAAAGGGCA

Downstream 100 bases:

>100_bases
CACCTTGAACGATATGGATGAACGACACAAAGAAAATTCAATTCCGTAAGTAATTGCCATGAGTACACATAACAAAACAG
CTCTGATTCTCGGGGGCGGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSECQNVTDRDSDPCVLCRSSGR
DRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGIGPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTS
LYISRLLKPLGIAVSKIARGIPVGAELEFIDEATLSRAMEGRSAM

Sequences:

>Translated_205_residues
MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSECQNVTDRDSDPCVLCRSSGR
DRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGIGPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTS
LYISRLLKPLGIAVSKIARGIPVGAELEFIDEATLSRAMEGRSAM
>Mature_205_residues
MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSECQNVTDRDSDPCVLCRSSGR
DRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGIGPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTS
LYISRLLKPLGIAVSKIARGIPVGAELEFIDEATLSRAMEGRSAM

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=200, Percent_Identity=43, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CHLPD (A1BFN2)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_911633.1
- ProteinModelPortal:   A1BFN2
- SMR:   A1BFN2
- STRING:   A1BFN2
- GeneID:   4570749
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_1172
- NMPDR:   fig|290317.7.peg.1244
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR011257
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- Gene3D:   G3DSA:1.10.340.30
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22569; Mature: 22569

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSE
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CQNVTDRDSDPCVLCRSSGRDRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGI
HCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHEECCCCCHHHHHHHHHHHHHHHCCC
GPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIARG
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
IPVGAELEFIDEATLSRAMEGRSAM
CCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSE
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CQNVTDRDSDPCVLCRSSGRDRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGI
HCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHEECCCCCHHHHHHHHHHHHHHHCCC
GPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIARG
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
IPVGAELEFIDEATLSRAMEGRSAM
CCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA