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The map label for this gene is rmuC [H]

Identifier: 119356880

GI number: 119356880

Start: 1195433

End: 1196746

Strand: Direct

Name: rmuC [H]

Synonym: Cpha266_1053

Alternate gene names: 119356880

Gene position: 1195433-1196746 (Clockwise)

Preceding gene: 119356878

Following gene: 119356883

Centisome position: 38.15

GC content: 52.74

Gene sequence:

>1314_bases
ATGAGTGACGGGATGATGGTTTTGCTTCTTGTTCTGGTGTTCGGGCTTCTTTTTTTTATCGTTTTTCGCATTCTGCGCGA
TGCTCCCCTCAAAGAAGAACTGCACCAGCTCAGGGTTGTCGAGCGGGAGCTTCGCTCTCAGGTGGATGAGCTAAAGGCAA
AAACCGGGGAGCTTGATATATTGAAAGTTATCCGTGCCCGTCTCGAATCAGATCTTGACCATGAGCGCAGCAATGCATTG
GAGAAAATTGCGCTTCTGCAGCAATCGGAATTACGACTGAAAACAGAGTTCGAGCATCTTGCCGGGCGTATTCTTGAAGA
GCGTGGAAGCTCGCTTGGAGAGGAGAACCGGGTTAGAATGGCTTCACTTCTGCAGCCGCTTAAAGAGCAGCTCGATGCAT
TCCGCACGCGAGTCGATGAGGTACATCGAAACGATACCGAGATTTCCGCCCGACTTATCGAGCAGGTACGACAGCTCCAG
GAGCTCAGCGGGCAGGTGAGCAGAGAGGCTAATTTACTTGCCCGGGCTATCAAGGGCGAGAGTAAAGCACAGGGCGACTG
GGGAGAACTGATCATTGAAAGGATCTTTGAGGCTTCGGGGCTTGAAAAAGGGCGGGAGTACACCGTACAGGAGAGTTTCA
GGATGGAGGATGGTACTCTGAAACGGCCTGATTTTATGGTTCTCCTTCCGGGTGAAAAGGCCGTTATAGTCGATTCAAAA
GTCTCTCTGACGGCCTATGAACGCTATTGCAGCCTTGATGATGTTGCCAGGCGGGAGCAGGCTCTTCGGGAGCATGTTCA
ATCGGTGCGCCGTCACATAGCCGGGTTGCAGGAAAAGGAGTACAGCTTTATCAAGGGGAATCGTACGCTTGATTTCGTCA
TCATGTGCATTCCCGTGGAACCGGCATGGCAGGCTCTCATGCAGGCAGACCCGGAGATCGTATACGAACTTGGCAGAAAA
AACGTGGTGCTGACCGGCCCGACCACGCTGATGATCACCCTGAAGCTTATTGCGCAGCTCTGGCGGCGCGAGAAAGAGAA
TCGTAATGCCGAGGTTATTGCCGAAAAGGCCGGTCGGATCTACGATCAGGTTGTTCTGATAGTCGAAGCCATGGAGGATG
CACGAAAAAAACTTTCGGGCGTCTCCCAGTCATTTGATCTTGCCATGAAACGACTCACGGAAGGACGGGGGAGTCTGGCG
TCGAAGGTTGAGGAAATCCGTCGGCTTGGGGCAAAGGTCAGCAAACAGCTTCCCGGGGGTTTTGACGATAACGAAGAGAG
CGAGAGCGTCAACGGGAATAGCTCGGCCTTCTGA

Upstream 100 bases:

>100_bases
TGGGTAAAGGGTTGTGCCGATATTGTTGTTCATGAATGATGCTTTTATTTAAGACGTGGCAGGTTTTTGCAAATAAATCA
AAAGGAACAGCGTGATTGTT

Downstream 100 bases:

>100_bases
GCCGCTCTCCTGCAATTTTCTCATATCAGGGCACTTCAGTGTATTTGTTTCGGTTGTTGTGACTCCGTCAGTCCTTCACT
CAAACCGCTCACGACATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSDGMMVLLLVLVFGLLFFIVFRILRDAPLKEELHQLRVVERELRSQVDELKAKTGELDILKVIRARLESDLDHERSNAL
EKIALLQQSELRLKTEFEHLAGRILEERGSSLGEENRVRMASLLQPLKEQLDAFRTRVDEVHRNDTEISARLIEQVRQLQ
ELSGQVSREANLLARAIKGESKAQGDWGELIIERIFEASGLEKGREYTVQESFRMEDGTLKRPDFMVLLPGEKAVIVDSK
VSLTAYERYCSLDDVARREQALREHVQSVRRHIAGLQEKEYSFIKGNRTLDFVIMCIPVEPAWQALMQADPEIVYELGRK
NVVLTGPTTLMITLKLIAQLWRREKENRNAEVIAEKAGRIYDQVVLIVEAMEDARKKLSGVSQSFDLAMKRLTEGRGSLA
SKVEEIRRLGAKVSKQLPGGFDDNEESESVNGNSSAF

Sequences:

>Translated_437_residues
MSDGMMVLLLVLVFGLLFFIVFRILRDAPLKEELHQLRVVERELRSQVDELKAKTGELDILKVIRARLESDLDHERSNAL
EKIALLQQSELRLKTEFEHLAGRILEERGSSLGEENRVRMASLLQPLKEQLDAFRTRVDEVHRNDTEISARLIEQVRQLQ
ELSGQVSREANLLARAIKGESKAQGDWGELIIERIFEASGLEKGREYTVQESFRMEDGTLKRPDFMVLLPGEKAVIVDSK
VSLTAYERYCSLDDVARREQALREHVQSVRRHIAGLQEKEYSFIKGNRTLDFVIMCIPVEPAWQALMQADPEIVYELGRK
NVVLTGPTTLMITLKLIAQLWRREKENRNAEVIAEKAGRIYDQVVLIVEAMEDARKKLSGVSQSFDLAMKRLTEGRGSLA
SKVEEIRRLGAKVSKQLPGGFDDNEESESVNGNSSAF
>Mature_436_residues
SDGMMVLLLVLVFGLLFFIVFRILRDAPLKEELHQLRVVERELRSQVDELKAKTGELDILKVIRARLESDLDHERSNALE
KIALLQQSELRLKTEFEHLAGRILEERGSSLGEENRVRMASLLQPLKEQLDAFRTRVDEVHRNDTEISARLIEQVRQLQE
LSGQVSREANLLARAIKGESKAQGDWGELIIERIFEASGLEKGREYTVQESFRMEDGTLKRPDFMVLLPGEKAVIVDSKV
SLTAYERYCSLDDVARREQALREHVQSVRRHIAGLQEKEYSFIKGNRTLDFVIMCIPVEPAWQALMQADPEIVYELGRKN
VVLTGPTTLMITLKLIAQLWRREKENRNAEVIAEKAGRIYDQVVLIVEAMEDARKKLSGVSQSFDLAMKRLTEGRGSLAS
KVEEIRRLGAKVSKQLPGGFDDNEESESVNGNSSAF

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=370, Percent_Identity=39.7297297297297, Blast_Score=282, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 49768; Mature: 49637

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGMMVLLLVLVFGLLFFIVFRILRDAPLKEELHQLRVVERELRSQVDELKAKTGELDI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LKVIRARLESDLDHERSNALEKIALLQQSELRLKTEFEHLAGRILEERGSSLGEENRVRM
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ASLLQPLKEQLDAFRTRVDEVHRNDTEISARLIEQVRQLQELSGQVSREANLLARAIKGE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SKAQGDWGELIIERIFEASGLEKGREYTVQESFRMEDGTLKRPDFMVLLPGEKAVIVDSK
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCC
VSLTAYERYCSLDDVARREQALREHVQSVRRHIAGLQEKEYSFIKGNRTLDFVIMCIPVE
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEEECCC
PAWQALMQADPEIVYELGRKNVVLTGPTTLMITLKLIAQLWRREKENRNAEVIAEKAGRI
HHHHHHHHCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YDQVVLIVEAMEDARKKLSGVSQSFDLAMKRLTEGRGSLASKVEEIRRLGAKVSKQLPGG
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
FDDNEESESVNGNSSAF
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDGMMVLLLVLVFGLLFFIVFRILRDAPLKEELHQLRVVERELRSQVDELKAKTGELDI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LKVIRARLESDLDHERSNALEKIALLQQSELRLKTEFEHLAGRILEERGSSLGEENRVRM
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ASLLQPLKEQLDAFRTRVDEVHRNDTEISARLIEQVRQLQELSGQVSREANLLARAIKGE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SKAQGDWGELIIERIFEASGLEKGREYTVQESFRMEDGTLKRPDFMVLLPGEKAVIVDSK
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCC
VSLTAYERYCSLDDVARREQALREHVQSVRRHIAGLQEKEYSFIKGNRTLDFVIMCIPVE
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEEECCC
PAWQALMQADPEIVYELGRKNVVLTGPTTLMITLKLIAQLWRREKENRNAEVIAEKAGRI
HHHHHHHHCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YDQVVLIVEAMEDARKKLSGVSQSFDLAMKRLTEGRGSLASKVEEIRRLGAKVSKQLPGG
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
FDDNEESESVNGNSSAF
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]