Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356878
Identifier: 119356878
GI number: 119356878
Start: 1190218
End: 1191468
Strand: Direct
Name: 119356878
Synonym: Cpha266_1051
Alternate gene names: NA
Gene position: 1190218-1191468 (Clockwise)
Preceding gene: 119356877
Following gene: 119356880
Centisome position: 37.98
GC content: 50.36
Gene sequence:
>1251_bases ATGATCGCCATGGACCCGATTTGCATCAATAACTACTGTTTCGACCGGATTCATCTCTGGATACAATACGACTGGCAGAT TCCCCAGTTCATTGAAGTGGTTATAGAGGTTTTCTATCCGAAAAATCGCAAGGCAAATGGTCTTGTGATGTTTAATCATG GATTTCTTGTTGGCAACGACCTCTTTTTTTACCCCAAAAAAGTTATAGGAGCCTTTACAGGCGATAATCCGCTCTTCGCT ATCAATCCCTCTGCGTATTATAACTACAGTGCGGCTATCGTTGAGCAGAACTGGGCCATGGCCTTTGTCAGCGCTGCGCA TTCACAGACAGTCGGTATTCCGGGTATTGATATCGGAGGGAATCCGAGGGTGGGGCAAGAGGCCTATGCGGCAGCCTCCT ATCTCATCAAATACGGCGCTACCGATTTTTTTTACAGGGAGGAAGAAACGAGTCGGAATCGCTCGTTTTTTGACAGCACG GTTGCCACAAGTGCAAAATTCATGGTGTCCAACAAGGTGATTTTCGCCGGGCACTCGGTAGGTGGCGCACATGCGCAGGC TGCAGCCTGCGGATTTGAAAAACTGCAGGAGCTTGGCAAAAAAAACTATCGGGTTTTCGATCCGGTGATGTTCGACAGGG AGTTTATTCCTGCCTATTCGGAGCGTCTTTCAAAATGGGATCCTGCCGACAGAGCCGATCCGGTCGGACTTTTGCAGTTG TCTCCGGTCGACCAGAAAATACCGATTTTGTCACCTGGCATGAAATTATACCGTGAAGCACTTTCAACGGCAGCAATGCC GATGCTGATGATTGTGGGCGAGTGCGACTGTGCCTGTCTTGACGATTCCAACCCGCCGGCCTGCTCGGATGACCCAAAAA AAGTTACCCAGTACACTCAGCTTGCTCCGGCAAAAAGCGATTCCTGGTCAGTGCTCGCAAAGGTCGCAAAGGGAAGCCAT TGTGGTTACCTTACTCTTAAAAACGATCTCTGCAGCATGGCGGACAAACCATCGGAGTGCAAGCGCTGTCCGGGCGTCGA GAGCTACAAGCCAGAAGGAGATGAAACAGCGTTAACGACGGAGTTGCTGAAGCGCCTGATCGCCCACTGTTCCCTTCATG GAGGGCATGCTGAAAATCGCGACAGCTGGCTTCGGAGTGAGTGTATTACCTGGCTGAACAAGGAGAGCCCTGACGGAGTT GTAAAGCTTGTGCCGTTCAGCGACGGTCAATTTGTTGCATATGCCCGTTAA
Upstream 100 bases:
>100_bases AATCTCCGGAGGCGCAAGGCTTTAAGATCATTGTTCAGACAAATACTCTTGTTGCCGGTTTTGCCCCTTTGGTCTCTCAT AGCTTAGTCAACTCTTAAAC
Downstream 100 bases:
>100_bases CTGAATGGTGAAAAGGGCAAGATCTGAAATTCAGTGCGCTCCTGTAGCCCCGCGGTACCCTGCTATGGAGAGCAGAGGTG ACCGCGGGACTTCTTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MIAMDPICINNYCFDRIHLWIQYDWQIPQFIEVVIEVFYPKNRKANGLVMFNHGFLVGNDLFFYPKKVIGAFTGDNPLFA INPSAYYNYSAAIVEQNWAMAFVSAAHSQTVGIPGIDIGGNPRVGQEAYAAASYLIKYGATDFFYREEETSRNRSFFDST VATSAKFMVSNKVIFAGHSVGGAHAQAAACGFEKLQELGKKNYRVFDPVMFDREFIPAYSERLSKWDPADRADPVGLLQL SPVDQKIPILSPGMKLYREALSTAAMPMLMIVGECDCACLDDSNPPACSDDPKKVTQYTQLAPAKSDSWSVLAKVAKGSH CGYLTLKNDLCSMADKPSECKRCPGVESYKPEGDETALTTELLKRLIAHCSLHGGHAENRDSWLRSECITWLNKESPDGV VKLVPFSDGQFVAYAR
Sequences:
>Translated_416_residues MIAMDPICINNYCFDRIHLWIQYDWQIPQFIEVVIEVFYPKNRKANGLVMFNHGFLVGNDLFFYPKKVIGAFTGDNPLFA INPSAYYNYSAAIVEQNWAMAFVSAAHSQTVGIPGIDIGGNPRVGQEAYAAASYLIKYGATDFFYREEETSRNRSFFDST VATSAKFMVSNKVIFAGHSVGGAHAQAAACGFEKLQELGKKNYRVFDPVMFDREFIPAYSERLSKWDPADRADPVGLLQL SPVDQKIPILSPGMKLYREALSTAAMPMLMIVGECDCACLDDSNPPACSDDPKKVTQYTQLAPAKSDSWSVLAKVAKGSH CGYLTLKNDLCSMADKPSECKRCPGVESYKPEGDETALTTELLKRLIAHCSLHGGHAENRDSWLRSECITWLNKESPDGV VKLVPFSDGQFVAYAR >Mature_416_residues MIAMDPICINNYCFDRIHLWIQYDWQIPQFIEVVIEVFYPKNRKANGLVMFNHGFLVGNDLFFYPKKVIGAFTGDNPLFA INPSAYYNYSAAIVEQNWAMAFVSAAHSQTVGIPGIDIGGNPRVGQEAYAAASYLIKYGATDFFYREEETSRNRSFFDST VATSAKFMVSNKVIFAGHSVGGAHAQAAACGFEKLQELGKKNYRVFDPVMFDREFIPAYSERLSKWDPADRADPVGLLQL SPVDQKIPILSPGMKLYREALSTAAMPMLMIVGECDCACLDDSNPPACSDDPKKVTQYTQLAPAKSDSWSVLAKVAKGSH CGYLTLKNDLCSMADKPSECKRCPGVESYKPEGDETALTTELLKRLIAHCSLHGGHAENRDSWLRSECITWLNKESPDGV VKLVPFSDGQFVAYAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46184; Mature: 46184
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMDPICINNYCFDRIHLWIQYDWQIPQFIEVVIEVFYPKNRKANGLVMFNHGFLVGND CCCCCCEEECCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECC LFFYPKKVIGAFTGDNPLFAINPSAYYNYSAAIVEQNWAMAFVSAAHSQTVGIPGIDIGG EEECCHHHHEEECCCCCEEEECCCCEECEEEEEEECCHHEEHHHHHCCCCCCCCCCCCCC NPRVGQEAYAAASYLIKYGATDFFYREEETSRNRSFFDSTVATSAKFMVSNKVIFAGHSV CCCCCHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHCEEEEEECEEEEEECCC GGAHAQAAACGFEKLQELGKKNYRVFDPVMFDREFIPAYSERLSKWDPADRADPVGLLQL CCCHHHHHHHHHHHHHHHCCCCCEEECHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEE SPVDQKIPILSPGMKLYREALSTAAMPMLMIVGECDCACLDDSNPPACSDDPKKVTQYTQ CCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHH LAPAKSDSWSVLAKVAKGSHCGYLTLKNDLCSMADKPSECKRCPGVESYKPEGDETALTT HCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHH ELLKRLIAHCSLHGGHAENRDSWLRSECITWLNKESPDGVVKLVPFSDGQFVAYAR HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEC >Mature Secondary Structure MIAMDPICINNYCFDRIHLWIQYDWQIPQFIEVVIEVFYPKNRKANGLVMFNHGFLVGND CCCCCCEEECCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECC LFFYPKKVIGAFTGDNPLFAINPSAYYNYSAAIVEQNWAMAFVSAAHSQTVGIPGIDIGG EEECCHHHHEEECCCCCEEEECCCCEECEEEEEEECCHHEEHHHHHCCCCCCCCCCCCCC NPRVGQEAYAAASYLIKYGATDFFYREEETSRNRSFFDSTVATSAKFMVSNKVIFAGHSV CCCCCHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHCEEEEEECEEEEEECCC GGAHAQAAACGFEKLQELGKKNYRVFDPVMFDREFIPAYSERLSKWDPADRADPVGLLQL CCCHHHHHHHHHHHHHHHCCCCCEEECHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEE SPVDQKIPILSPGMKLYREALSTAAMPMLMIVGECDCACLDDSNPPACSDDPKKVTQYTQ CCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHH LAPAKSDSWSVLAKVAKGSHCGYLTLKNDLCSMADKPSECKRCPGVESYKPEGDETALTT HCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHH ELLKRLIAHCSLHGGHAENRDSWLRSECITWLNKESPDGVVKLVPFSDGQFVAYAR HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA