Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356883

Identifier: 119356883

GI number: 119356883

Start: 1200434

End: 1201000

Strand: Direct

Name: 119356883

Synonym: Cpha266_1061

Alternate gene names: NA

Gene position: 1200434-1201000 (Clockwise)

Preceding gene: 119356880

Following gene: 119356884

Centisome position: 38.3

GC content: 47.44

Gene sequence:

>567_bases
ATGAAGGATATGCAAGCTCCTTTTTCATGGATTCGTGCAGAACGCCAGAAAATACTCTTTAATGTATTTGCTGCAATCTC
GGTTCTGCTTATGGCCGTGCTTTACCATATCGGAAAGCCGCTCGTTATTCCGGAACAGGGTGTTTCGTTCGGCATTGTCG
ACATGGAGTTGCCGGTAACGTTTTTACGTGCGGATTCGATCCTGTCTGTATGGGAACGTCATGGAGTTGTGGAGCTGGGC
GTGCGGCAGACTTTGCTGGATTTTCTGTTTCTCATGCTCTATCCTGTGGCGTTGAGCCTGCTTTGCATGAGGCTTGCCAA
AAGAAGGTTCGGGTTTATGGCATCTCTTGGCATTGCTCTCTCCTGGGTCGTTCTTCTCTGCATTCCGTTTGACGCATGCG
AGAATATCCTGATTCTGAAGATGCTTGGCGGCAACACTTCGTCGCCTTATCCTGAGTTTACCACAATCATGGCCGTAATG
AAATTCAGTCTGATCGGTTGTTCGCTGATCGGTTATCCTTTTCTTTGTCTGTTTCAGAAGCTTTTGAAAAGCTGCAAGAC
CTGTTGA

Upstream 100 bases:

>100_bases
TGAAAGGCATGTTCATTTGATACAGTTACTGATTAACCGCTTCTTTTTTCAGGATTCTATCACAAGCCGGTTACCTCATT
TTTCAACTTTCTCATGACGA

Downstream 100 bases:

>100_bases
AAAATGTTTTTAAGTCGTTCTGCAGCGGCATCATCGCTGCTGGTGGCTTGATATGGTTTTTACTCGACTTATAAGGCTGA
AAGCCTAAACGTGCTGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVTFLRADSILSVWERHGVVELG
VRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIALSWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVM
KFSLIGCSLIGYPFLCLFQKLLKSCKTC

Sequences:

>Translated_188_residues
MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVTFLRADSILSVWERHGVVELG
VRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIALSWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVM
KFSLIGCSLIGYPFLCLFQKLLKSCKTC
>Mature_188_residues
MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVTFLRADSILSVWERHGVVELG
VRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIALSWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVM
KFSLIGCSLIGYPFLCLFQKLLKSCKTC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21136; Mature: 21136

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEHHHHHH
FLRADSILSVWERHGVVELGVRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVMKFSLIGCSLIGYPFLCLFQK
HHHHHHHHCHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKSCKTC
HHHHHCCC
>Mature Secondary Structure
MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEHHHHHH
FLRADSILSVWERHGVVELGVRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVMKFSLIGCSLIGYPFLCLFQK
HHHHHHHHCHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKSCKTC
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA