Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356836
Identifier: 119356836
GI number: 119356836
Start: 1147552
End: 1148325
Strand: Direct
Name: 119356836
Synonym: Cpha266_1009
Alternate gene names: NA
Gene position: 1147552-1148325 (Clockwise)
Preceding gene: 119356835
Following gene: 119356848
Centisome position: 36.62
GC content: 49.48
Gene sequence:
>774_bases ATGCTGATAACGGCAGAAACTCTCCGGCATGAACTGGAGGCTATCGCAGATCCTGCGGTGGCGGCTGTTTCGAAAAGCTT TTTCAAGACGGGCCCTGGAGAGTATGGGGAGGGTGATCTTTTTCGTGGAATTCGTGTGCCGGTGCTCAGAAAAATCTCCC GACGTTCTGAAGCTCTTTGTCTTGACGGAATCGTTGAGCTGCTTCACTCTCCTTTTCATGAAGACAGGTTGCTTGCTCTT CTTGTGCTTGTCAGGCGCTTTTCTCATGCAAGCGAGAGTGCGCGCGAGGAGTTGTTTGATCTGTACCTGTCAAATACGCT CTTCATCAATAACTGGGATCTCGTTGATACCTCAGCCGAACATCTGGTAGGATGCTTCCTTTTCAACAGGGATAAAGCGC CTCTCTATCGGCTGGTGCTCTCCGAATGCATTTGGGAAAGGCGTATTGCCATAATAGCAACTTTTTATTTTATCAGGCAT GGACGGTTTGGCGAAACCCTCGACCTTGCAGAACAACTTCTTTTTGATCCAGAAGAACTGATTCATAAAGCAGCCGGATG GATGCTCAGGGAGGTGGGCAAGCGTGACCAGCAGCTTGAGGAGGCTTTTCTGGTTAAGCATTACCGGTTGATGCCGAGAG TCATGCTCCGCTATGCCATTGAACGGTTTGCGGAGGAGAAACGGCAACTCTATCTTAAAGGGCTTGTGCCGGATCGGTTT CAGGGGTTCAGTAATACTGAACAGGATGAGTTGTTGCCGGGTTACCTGATTTGA
Upstream 100 bases:
>100_bases ACAGCTTGGTTCGGAACTTAATCAGGTACAGGAGAAACTGGAAAAACAGATTTTGCGATGGACGGAACTTGCAGAAATGG CATAACATGCTCAAACCCCT
Downstream 100 bases:
>100_bases AATTCAGGATGGCCGGTTTGCCACAGTCCGAAACTCAATACATCGGCAAGGGATTCAAACTCCATCTGTTTCGTGTTTCC CATGCCGTGTCCGGCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Alkylation Repair Protein; DNA Alkylation Repair Superfamily; Glucose/Ribitol Dehydrogenase
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALCLDGIVELLHSPFHEDRLLAL LVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAEHLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRH GRFGETLDLAEQLLFDPEELIHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF QGFSNTEQDELLPGYLI
Sequences:
>Translated_257_residues MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALCLDGIVELLHSPFHEDRLLAL LVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAEHLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRH GRFGETLDLAEQLLFDPEELIHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF QGFSNTEQDELLPGYLI >Mature_257_residues MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALCLDGIVELLHSPFHEDRLLAL LVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAEHLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRH GRFGETLDLAEQLLFDPEELIHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF QGFSNTEQDELLPGYLI
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29857; Mature: 29857
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALC CEECHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH LDGIVELLHSPFHEDRLLALLVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHH HLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRHGRFGETLDLAEQLLFDPEEL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH IHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QGFSNTEQDELLPGYLI CCCCCCCHHHCCCCCCC >Mature Secondary Structure MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALC CEECHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH LDGIVELLHSPFHEDRLLALLVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHH HLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRHGRFGETLDLAEQLLFDPEEL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH IHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QGFSNTEQDELLPGYLI CCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA