Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356848
Identifier: 119356848
GI number: 119356848
Start: 1160162
End: 1161190
Strand: Direct
Name: 119356848
Synonym: Cpha266_1021
Alternate gene names: NA
Gene position: 1160162-1161190 (Clockwise)
Preceding gene: 119356836
Following gene: 119356855
Centisome position: 37.02
GC content: 46.36
Gene sequence:
>1029_bases ATGAAGAAAACCCTTTCCACTGTTTTTCTCTTTTTAAGCGTGATATTGTTCACAGCTTTTTCTTCATCGGCCAAAGCGGG AGCAGGGGACTCGCTGCTTGTCATGTGGTGGAATGCGGAAAATCTCTTTGATTCCATTAACGACCCGGCTGTTGACGACG ATGACTTTACGCCGGAAGGGAAGTTTCGCTGGACTGAAAAAAAACTGCAACTCAAGCTCATGCGTGTTCAGCATCTTTTC AATGCAATCAATTCTCATCCACAGTATAGCGCTTATCCTGATATTATTGCTTTTGCTGAAACGGAAAACAAAAAAGTTTT TGCAAAAGCCATAGGTGTGATTAAATCCGGTGGCTATAAAATGGTTTATCATGAATCCGGTGATCCAAGGGGGATCGATA TCGGGTTGGCTTTCAATTCCCGGAAAGTCGTTTTCAAAGCATCCAAGGCTTATCAGATTCCTGTTGACGACAAGCCATCC CGACCGGTTATCGTTGCGGAATTTTCCGTTTTCAGCCATCCCTTTCATATTGTACTCAACCATTGGCCATCGAGGGCGTT TGATATCCGATGGACTGAACCCAAACGAATTGGTGCGGCAACGGTCGTACGTCATATCGCAGACAGCCTCCTGCAGAAAA ACAGCAAGGCAGATATCATCATCATGGGGGATTTTAACGATGAACCGGAAAACCGCTCGTTGAAAAAGGTACTCGGCTCA TCCTTTGATGCCTCTGCGGTTCAGGCATCACGCGGCAGGCTCTTTTATAACTGCTGGGCTGATTGCCGTGGTATTGGAAG TTACTTCTATCGCGGTCATTGGGAGAAAATAGACCAGATTCTTGTTTCCGGCGGTTTGTTTGATCGAAAGGGGCTCTGGC TGCCGGAAAACGCTTTCCACTGTTTTGCCTTTTCGGGTATGATGGACGAAGGTGGCAAAAAGCTTTGGCCGACCTATGAA AAAGGTGTCTATAAAGGAGGCTATTCCGACCATCTGCCGCTTCTGCTTATGATACGAACGCAGCGATAA
Upstream 100 bases:
>100_bases CTGGATCGTTGGATGAAGAAATCTTGTTTCCGGCTGAAAAATCCCGAATAAGTTACATATCATTCCGTGAAAGAAAAAAT TTTGCAAAGACTAAGATCTC
Downstream 100 bases:
>100_bases AGCGTTTGCCCGTTTTTCCTGCAAGTTTGAACGGGTTTTCAAGCAGAAAGGTTCTGCTGATGCTGAGCAAACAGATCATT TTCCGATAATCCGGAATCCG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEGKFRWTEKKLQLKLMRVQHLF NAINSHPQYSAYPDIIAFAETENKKVFAKAIGVIKSGGYKMVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDDKPS RPVIVAEFSVFSHPFHIVLNHWPSRAFDIRWTEPKRIGAATVVRHIADSLLQKNSKADIIIMGDFNDEPENRSLKKVLGS SFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGLFDRKGLWLPENAFHCFAFSGMMDEGGKKLWPTYE KGVYKGGYSDHLPLLLMIRTQR
Sequences:
>Translated_342_residues MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEGKFRWTEKKLQLKLMRVQHLF NAINSHPQYSAYPDIIAFAETENKKVFAKAIGVIKSGGYKMVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDDKPS RPVIVAEFSVFSHPFHIVLNHWPSRAFDIRWTEPKRIGAATVVRHIADSLLQKNSKADIIIMGDFNDEPENRSLKKVLGS SFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGLFDRKGLWLPENAFHCFAFSGMMDEGGKKLWPTYE KGVYKGGYSDHLPLLLMIRTQR >Mature_342_residues MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEGKFRWTEKKLQLKLMRVQHLF NAINSHPQYSAYPDIIAFAETENKKVFAKAIGVIKSGGYKMVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDDKPS RPVIVAEFSVFSHPFHIVLNHWPSRAFDIRWTEPKRIGAATVVRHIADSLLQKNSKADIIIMGDFNDEPENRSLKKVLGS SFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGLFDRKGLWLPENAFHCFAFSGMMDEGGKKLWPTYE KGVYKGGYSDHLPLLLMIRTQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38709; Mature: 38709
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCCCCC KFRWTEKKLQLKLMRVQHLFNAINSHPQYSAYPDIIAFAETENKKVFAKAIGVIKSGGYK CEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEE MVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDDKPSRPVIVAEFSVFSHPFHIVLN EEEECCCCCCEEEEEEEECCCEEEEEECCEEECCCCCCCCCCEEEEEHHHHCCCEEEEEE HWPSRAFDIRWTEPKRIGAATVVRHIADSLLQKNSKADIIIMGDFNDEPENRSLKKVLGS CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCC SFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGLFDRKGLWLPENAFH CCCCHHHHHHCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE CFAFSGMMDEGGKKLWPTYEKGVYKGGYSDHLPLLLMIRTQR EEEEECCHHCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCCCCC KFRWTEKKLQLKLMRVQHLFNAINSHPQYSAYPDIIAFAETENKKVFAKAIGVIKSGGYK CEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEE MVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDDKPSRPVIVAEFSVFSHPFHIVLN EEEECCCCCCEEEEEEEECCCEEEEEECCEEECCCCCCCCCCEEEEEHHHHCCCEEEEEE HWPSRAFDIRWTEPKRIGAATVVRHIADSLLQKNSKADIIIMGDFNDEPENRSLKKVLGS CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCC SFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGLFDRKGLWLPENAFH CCCCHHHHHHCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE CFAFSGMMDEGGKKLWPTYEKGVYKGGYSDHLPLLLMIRTQR EEEEECCHHCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA