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The map label for this gene is yfmR [H]

Identifier: 119356835

GI number: 119356835

Start: 1145647

End: 1147536

Strand: Direct

Name: yfmR [H]

Synonym: Cpha266_1008

Alternate gene names: 119356835

Gene position: 1145647-1147536 (Clockwise)

Preceding gene: 119356832

Following gene: 119356836

Centisome position: 36.56

GC content: 48.94

Gene sequence:

>1890_bases
ATGGTGCTTTTAACGGTTGAAGGACTTCAGAAAAAGTATGGTCTGAAGCATTTGTTTGAGGATGTTTCGTTTGGAATTGA
TGATCGTGACAAGATCGGTCTTATCGGTGCGAACGGGAGCGGGAAGAGTACGCTTCTGAAAATTCTTGCAGGGGTTGAAA
CGCCTGACAAGGGCAAGGTTATGGTGGCAAACCAGAAGAGGATCGCCTATCTGCCCCAGGATTCTCCCTATAATCCTGAG
GATACCGTGCTGGAAGCAATTCTGAAGTCGAGCGACAAGGTCATGGATCTTATCTATCAATATGAGCTGGTCTGCAAGGA
GCTGGAAACAAACCATGATGATCCGCTGATCGAGCGGATGAGTCAGCTTTCACATGAACTCGATGTAACGGGCGCATGGG
AACTGGAGTCGAATGCCAGTACCGTACTTGGCAAACTTGGCCTGTACGATCTTGATGCAGTCATGGGAACTCTTTCCGGA
GGTCAGCGTAAACGGGTTGCTCTGGCTCATGCTCTTGTTGTTCCGAGCGACGGTCTCATTCTTGATGAACCGACCAACCA
TCTTGACGCCGACAGCGTTGAGTGGCTTGAACAGTATATAAGGCGCTATCAGGGTGCTGTTCTGTTAATTACGCATGATC
GTTATTTTCTTGACCGTGTGGCAACGCGCATGATCGAACTGGATGGACGGACGGCAGTAACCTATACCGGCGGCTATTCG
AGTTATCTGCAGCAGAAAGCTGAACAGGAAGAACAGGCGATCAGGGATGACCGCAAGCGCCAGGCTCTTGTCCGTCAGGA
ACTTGACTGGATGAGGGGCGGATGCAAGGCTCGGACGACAAAACAGAAAGCGAGAATGCTTCGCGCGGAGAGTCTGGTTT
ATGCTCCGAAAAAGGAGAAGACGAAGGAGCTTGAGATCGGGTTTGGTGCAGGACGGCTGGGCGACAAAATCATTGAGTTT
CACGAAGTTTCAAAATCCTATGACGAGAAACTGCTCCTGCGGTCGTTTGAGTACCAGTTGCAGAAAGGAGATCGTATCGG
TATTATCGGGCCGAACGGTTCGGGAAAAACCACCCTTTTTGATATGATTACCGGGCGCGTATCGCCTGACAGCGGGCATA
TCGATATTGGTAAAACGGTGAAAATCGGATACTACGATCAGCAGAGTCGCGGTCTGGACGACTCCAAGCGGGTTATCGAG
TATATACAGGAGCATGCCGAGCAGATCAAAATAAAGGATGGACTGGTTTTTTCCGCATCGAAAATGCTTGAGCGTTTTCT
CTTTGCGCCTTCAACCCAGTACAGTTATATCAGCACCCTTTCGGGAGGTGAGCGCAGGCGACTCTATCTGCTCAAACAGC
TTATCGATTCGCCCAATGTGCTTCTTCTTGACGAACCAACCAATGATCTCGATATCCCTACACTCAGAGTGCTTGAGGAT
TATCTCGATACCTATACGGGTTGTCTTATCGTTGTCAGCCATGATCGATATTTTCTTGATCGTACGGTCGAGTATATTTT
TGCCTTTGAGGAGAATGGCCTTATTCGCCGTTATCCCGGTAACTACACCGTCTATCTTGATCTGAAAGCTTCCGAGGCGT
CAAAAAACGAGAAAAAACCGTTAAAAAAAGAGCCGTCGGTTTCCGTGCCCCCGAAGAAAGACAATTCATCAAAACAGAGC
AGGTCTGGCAGTAAGGAGAAGCGCGAACTGGAGATCCTTGAACGGTCTATTCAGGAAGCTGAAAGTCAGCAGTCAGAACT
TGCCGCACGTCTTGCGGCAGCCGGCAGCGATTTTGCATTGGTGCAACAGCTTGGTTCGGAACTTAATCAGGTACAGGAGA
AACTGGAAAAACAGATTTTGCGATGGACGGAACTTGCAGAAATGGCATAA

Upstream 100 bases:

>100_bases
TTAAAGTTTTTGCATGATAACAGGGGCAGCTCAATAATTTTTCGGCAAAATGGCATAACAAGCCAGGAGAGATGTCCAAT
ATAAGGAACGGTGAACAGGT

Downstream 100 bases:

>100_bases
CATGCTCAAACCCCTATGCTGATAACGGCAGAAACTCTCCGGCATGAACTGGAGGCTATCGCAGATCCTGCGGTGGCGGC
TGTTTCGAAAAGCTTTTTCA

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MVLLTVEGLQKKYGLKHLFEDVSFGIDDRDKIGLIGANGSGKSTLLKILAGVETPDKGKVMVANQKRIAYLPQDSPYNPE
DTVLEAILKSSDKVMDLIYQYELVCKELETNHDDPLIERMSQLSHELDVTGAWELESNASTVLGKLGLYDLDAVMGTLSG
GQRKRVALAHALVVPSDGLILDEPTNHLDADSVEWLEQYIRRYQGAVLLITHDRYFLDRVATRMIELDGRTAVTYTGGYS
SYLQQKAEQEEQAIRDDRKRQALVRQELDWMRGGCKARTTKQKARMLRAESLVYAPKKEKTKELEIGFGAGRLGDKIIEF
HEVSKSYDEKLLLRSFEYQLQKGDRIGIIGPNGSGKTTLFDMITGRVSPDSGHIDIGKTVKIGYYDQQSRGLDDSKRVIE
YIQEHAEQIKIKDGLVFSASKMLERFLFAPSTQYSYISTLSGGERRRLYLLKQLIDSPNVLLLDEPTNDLDIPTLRVLED
YLDTYTGCLIVVSHDRYFLDRTVEYIFAFEENGLIRRYPGNYTVYLDLKASEASKNEKKPLKKEPSVSVPPKKDNSSKQS
RSGSKEKRELEILERSIQEAESQQSELAARLAAAGSDFALVQQLGSELNQVQEKLEKQILRWTELAEMA

Sequences:

>Translated_629_residues
MVLLTVEGLQKKYGLKHLFEDVSFGIDDRDKIGLIGANGSGKSTLLKILAGVETPDKGKVMVANQKRIAYLPQDSPYNPE
DTVLEAILKSSDKVMDLIYQYELVCKELETNHDDPLIERMSQLSHELDVTGAWELESNASTVLGKLGLYDLDAVMGTLSG
GQRKRVALAHALVVPSDGLILDEPTNHLDADSVEWLEQYIRRYQGAVLLITHDRYFLDRVATRMIELDGRTAVTYTGGYS
SYLQQKAEQEEQAIRDDRKRQALVRQELDWMRGGCKARTTKQKARMLRAESLVYAPKKEKTKELEIGFGAGRLGDKIIEF
HEVSKSYDEKLLLRSFEYQLQKGDRIGIIGPNGSGKTTLFDMITGRVSPDSGHIDIGKTVKIGYYDQQSRGLDDSKRVIE
YIQEHAEQIKIKDGLVFSASKMLERFLFAPSTQYSYISTLSGGERRRLYLLKQLIDSPNVLLLDEPTNDLDIPTLRVLED
YLDTYTGCLIVVSHDRYFLDRTVEYIFAFEENGLIRRYPGNYTVYLDLKASEASKNEKKPLKKEPSVSVPPKKDNSSKQS
RSGSKEKRELEILERSIQEAESQQSELAARLAAAGSDFALVQQLGSELNQVQEKLEKQILRWTELAEMA
>Mature_629_residues
MVLLTVEGLQKKYGLKHLFEDVSFGIDDRDKIGLIGANGSGKSTLLKILAGVETPDKGKVMVANQKRIAYLPQDSPYNPE
DTVLEAILKSSDKVMDLIYQYELVCKELETNHDDPLIERMSQLSHELDVTGAWELESNASTVLGKLGLYDLDAVMGTLSG
GQRKRVALAHALVVPSDGLILDEPTNHLDADSVEWLEQYIRRYQGAVLLITHDRYFLDRVATRMIELDGRTAVTYTGGYS
SYLQQKAEQEEQAIRDDRKRQALVRQELDWMRGGCKARTTKQKARMLRAESLVYAPKKEKTKELEIGFGAGRLGDKIIEF
HEVSKSYDEKLLLRSFEYQLQKGDRIGIIGPNGSGKTTLFDMITGRVSPDSGHIDIGKTVKIGYYDQQSRGLDDSKRVIE
YIQEHAEQIKIKDGLVFSASKMLERFLFAPSTQYSYISTLSGGERRRLYLLKQLIDSPNVLLLDEPTNDLDIPTLRVLED
YLDTYTGCLIVVSHDRYFLDRTVEYIFAFEENGLIRRYPGNYTVYLDLKASEASKNEKKPLKKEPSVSVPPKKDNSSKQS
RSGSKEKRELEILERSIQEAESQQSELAARLAAAGSDFALVQQLGSELNQVQEKLEKQILRWTELAEMA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=524, Percent_Identity=30.7251908396947, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI27881506, Length=524, Percent_Identity=30.7251908396947, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI10947135, Length=526, Percent_Identity=30.2281368821293, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI69354671, Length=526, Percent_Identity=30.2281368821293, Blast_Score=186, Evalue=8e-47,
Organism=Homo sapiens, GI148612853, Length=554, Percent_Identity=27.9783393501805, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI27881501, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI30795238, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI31657092, Length=246, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI2367384, Length=519, Percent_Identity=41.233140655106, Blast_Score=375, Evalue=1e-105,
Organism=Escherichia coli, GI1787182, Length=651, Percent_Identity=32.7188940092166, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI1789751, Length=607, Percent_Identity=30.8072487644152, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787041, Length=543, Percent_Identity=29.2817679558011, Blast_Score=234, Evalue=2e-62,
Organism=Escherichia coli, GI87081782, Length=593, Percent_Identity=24.4519392917369, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1790525, Length=503, Percent_Identity=23.4592445328032, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI87081834, Length=240, Percent_Identity=30.4166666666667, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1789891, Length=243, Percent_Identity=28.8065843621399, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788165, Length=207, Percent_Identity=27.0531400966184, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1786398, Length=210, Percent_Identity=30.4761904761905, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=25, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788225, Length=212, Percent_Identity=25.4716981132075, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1789593, Length=189, Percent_Identity=30.1587301587302, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788761, Length=203, Percent_Identity=29.064039408867, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=530, Percent_Identity=27.9245283018868, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17555318, Length=527, Percent_Identity=28.0834914611006, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=29.1428571428571, Blast_Score=175, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6320874, Length=528, Percent_Identity=31.6287878787879, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6321121, Length=544, Percent_Identity=28.6764705882353, Blast_Score=179, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6325030, Length=402, Percent_Identity=25.1243781094527, Blast_Score=117, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=403, Percent_Identity=25.8064516129032, Blast_Score=113, Evalue=9e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=402, Percent_Identity=25.6218905472637, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24642252, Length=540, Percent_Identity=30, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI18859989, Length=540, Percent_Identity=30, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24641342, Length=515, Percent_Identity=27.1844660194175, Blast_Score=192, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24666836, Length=510, Percent_Identity=28.8235294117647, Blast_Score=186, Evalue=6e-47,
Organism=Drosophila melanogaster, GI24581191, Length=159, Percent_Identity=33.9622641509434, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581189, Length=159, Percent_Identity=33.9622641509434, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581193, Length=159, Percent_Identity=33.9622641509434, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581195, Length=159, Percent_Identity=33.9622641509434, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221500365, Length=151, Percent_Identity=30.4635761589404, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007184, Length=151, Percent_Identity=30.4635761589404, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71102; Mature: 71102

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLTVEGLQKKYGLKHLFEDVSFGIDDRDKIGLIGANGSGKSTLLKILAGVETPDKGKV
CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCE
MVANQKRIAYLPQDSPYNPEDTVLEAILKSSDKVMDLIYQYELVCKELETNHDDPLIERM
EEECCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SQLSHELDVTGAWELESNASTVLGKLGLYDLDAVMGTLSGGQRKRVALAHALVVPSDGLI
HHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCEE
LDEPTNHLDADSVEWLEQYIRRYQGAVLLITHDRYFLDRVATRMIELDGRTAVTYTGGYS
ECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHEECCCEEEEECCCHH
SYLQQKAEQEEQAIRDDRKRQALVRQELDWMRGGCKARTTKQKARMLRAESLVYAPKKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCC
TKELEIGFGAGRLGDKIIEFHEVSKSYDEKLLLRSFEYQLQKGDRIGIIGPNGSGKTTLF
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHH
DMITGRVSPDSGHIDIGKTVKIGYYDQQSRGLDDSKRVIEYIQEHAEQIKIKDGLVFSAS
HHHHCCCCCCCCCEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEHHH
KMLERFLFAPSTQYSYISTLSGGERRRLYLLKQLIDSPNVLLLDEPTNDLDIPTLRVLED
HHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
YLDTYTGCLIVVSHDRYFLDRTVEYIFAFEENGLIRRYPGNYTVYLDLKASEASKNEKKP
HHHHCCCEEEEEECCCHHHHHHHHHHEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCC
LKKEPSVSVPPKKDNSSKQSRSGSKEKRELEILERSIQEAESQQSELAARLAAAGSDFAL
CCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VQQLGSELNQVQEKLEKQILRWTELAEMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLLTVEGLQKKYGLKHLFEDVSFGIDDRDKIGLIGANGSGKSTLLKILAGVETPDKGKV
CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCE
MVANQKRIAYLPQDSPYNPEDTVLEAILKSSDKVMDLIYQYELVCKELETNHDDPLIERM
EEECCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SQLSHELDVTGAWELESNASTVLGKLGLYDLDAVMGTLSGGQRKRVALAHALVVPSDGLI
HHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCEE
LDEPTNHLDADSVEWLEQYIRRYQGAVLLITHDRYFLDRVATRMIELDGRTAVTYTGGYS
ECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHEECCCEEEEECCCHH
SYLQQKAEQEEQAIRDDRKRQALVRQELDWMRGGCKARTTKQKARMLRAESLVYAPKKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCC
TKELEIGFGAGRLGDKIIEFHEVSKSYDEKLLLRSFEYQLQKGDRIGIIGPNGSGKTTLF
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHH
DMITGRVSPDSGHIDIGKTVKIGYYDQQSRGLDDSKRVIEYIQEHAEQIKIKDGLVFSAS
HHHHCCCCCCCCCEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEHHH
KMLERFLFAPSTQYSYISTLSGGERRRLYLLKQLIDSPNVLLLDEPTNDLDIPTLRVLED
HHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
YLDTYTGCLIVVSHDRYFLDRTVEYIFAFEENGLIRRYPGNYTVYLDLKASEASKNEKKP
HHHHCCCEEEEEECCCHHHHHHHHHHEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCC
LKKEPSVSVPPKKDNSSKQSRSGSKEKRELEILERSIQEAESQQSELAARLAAAGSDFAL
CCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VQQLGSELNQVQEKLEKQILRWTELAEMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]