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The map label for this gene is yrvJ [H]

Identifier: 118477365

GI number: 118477365

Start: 1835049

End: 1836743

Strand: Direct

Name: yrvJ [H]

Synonym: BALH_1684

Alternate gene names: 118477365

Gene position: 1835049-1836743 (Clockwise)

Preceding gene: 118477364

Following gene: 118477367

Centisome position: 34.91

GC content: 36.4

Gene sequence:

>1695_bases
ATGAAAAAGATTTTAGCTAGTGTAGCAGTAGCTTCTGTTACAGGAAGTGTATTTATTAGTACTGCTCAAGCGAAAAATAC
TGTTATACAAAAAGAAGCAAAGCATGAGAAACCTACTGATGTAGTAAAATATGAAAATCAAGTAACAGTAAATACAAATG
CTTTACGTGTCCGCACACAACCAAATACGTCTAGTACAATAATGGGACGCGTGTATGAAGGAGAAGTTTTACAAGTTATT
GGAGAAGAAAACAGTTGGCTGAAAATTAATCATAAAGGAAAAACTGGCTATGTAAGTAGTGAATTTGTTTCGGAAAATAG
TGTATCAGCGAAGACGAATGTAAGCATGAGTCGTAGTAAAACTGTAATTGCTAATGTATTACGTGTTCGCACACAGCCAA
ATACGTCTAGTGCAATAATGGGGCGCGTGTATGAAGGGAAAGCTTTACAAGTTATTGGAGAAGAAAACGGTTGGTTGAAA
ATTAAACATAATGGAAAAGTAGGTTATGTAAGCAGTCAATTTGTAATAGACGGTACCTCAAATGGAAGTGACAAGAACAA
TGGAAAAGTTCAAGTAGCGAGTGGGAATTACAAAGTTAATGTATCTTCCCTCCGCGTGCGTACAGGTCCAAGTACTTCCC
ATACGATTTTAGGCTCTGTACATAAAGGGCAAATTGTTCAAGTAACTGGTGAAGTTCAAGATTGGGTCAAAATTAACTAT
AGTGGACAAACTGCTTATATTAGTAAAGATTACATTTTAAAGAATGATTTTAATGCAAATGTAGACCAAACGAATGAACA
ACAAAAGAATATTACGGTTCAAACTGACGGTACATATATTGTAGACGCTACTTCTTTACGTGTGCGTACAGGCCCTGCTA
CTTACCATAGTGTAATTGGTGGTGTATTAAACGGACGAATATTGCAAGTAACTGGCGTTGAAAATGGTTGGTTGAAAATT
AATCATAATGGAAGAACTGGTTATGTAAGTAGTGAATATGTAAAATTCGTAAAAGGAAATACGCCATCAAAACCTGAAAC
TAGTAATCCGTCTACTGAAGCAACAGTTGGTGACTACTATGTTAACGTAAACGTGTTAAATGTAAGAAGCGGCGCTGGTA
CAAATCATGGTGTAATCGGTGCATTATCAAAAGGAATAAAAGTACAGGTTCTATTTGAACAAAATGGCTGGGGGAAAATT
AATTACAACGGTAAAAGTGGTTATGTATCAAGTAAATTTTTATCAAAAACAAGTGAGATTGATGCAGAGAAGCAGCGGCA
ATCCCAGGAGGTAAATAAAACAAATGACTTTATTCAACCAGCTGCAGGAAGATATACTTCTAGATTTGAAAAACGTGGTG
GGAAAATGCATCACGGATTAGATATTGCTGCTTCAGGTACAGTGCCGGTTGTTGCTGCCGCAGAGGGTGTAATTACTCGC
TCTTATTATTCTACAAGCTATGGTAATGTTGTGTTTATTTCTCACAATATTAACGGACAAACATATACGACTGTATATGC
TCATTTAAAGAGCCGTTCTGTTTCTGCTGGTCAAAAAGTGAAGCAAGGACAACAACTTGGCATAATGGGGAATACAGGAC
AATCTGAAGGACAGCACTTACATTTTGAAATTCATAAAGGTGAATGGAATGCACAGAAGACTAATGCTATGGATCCAAAA
ATATACATTGGTTAA

Upstream 100 bases:

>100_bases
AAAGGATACTTATGCTGAATAGTTAGAACGAAAAGAACTGGAAGTCAATATAAAAATATAATGATAATCGAATGTTTTTA
TAGGAAGGTGTTTTGTATTT

Downstream 100 bases:

>100_bases
TTGAAAATTTATTATTTCAACATGAAATTGTATATCTTCTTAAGCAAAGAGAATTTCATAGATTTAGAAGTTTTGGACTA
ACGATTCAAAGTTTTTTTAT

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQPNTSSTIMGRVYEGEVLQVI
GEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLK
IKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQVTGEVQDWVKINY
SGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENGWLKI
NHNGRTGYVSSEYVKFVKGNTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGKI
NYNGKSGYVSSKFLSKTSEIDAEKQRQSQEVNKTNDFIQPAAGRYTSRFEKRGGKMHHGLDIAASGTVPVVAAAEGVITR
SYYSTSYGNVVFISHNINGQTYTTVYAHLKSRSVSAGQKVKQGQQLGIMGNTGQSEGQHLHFEIHKGEWNAQKTNAMDPK
IYIG

Sequences:

>Translated_564_residues
MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQPNTSSTIMGRVYEGEVLQVI
GEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLK
IKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQVTGEVQDWVKINY
SGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENGWLKI
NHNGRTGYVSSEYVKFVKGNTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGKI
NYNGKSGYVSSKFLSKTSEIDAEKQRQSQEVNKTNDFIQPAAGRYTSRFEKRGGKMHHGLDIAASGTVPVVAAAEGVITR
SYYSTSYGNVVFISHNINGQTYTTVYAHLKSRSVSAGQKVKQGQQLGIMGNTGQSEGQHLHFEIHKGEWNAQKTNAMDPK
IYIG
>Mature_564_residues
MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQPNTSSTIMGRVYEGEVLQVI
GEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLK
IKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQVTGEVQDWVKINY
SGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENGWLKI
NHNGRTGYVSSEYVKFVKGNTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGKI
NYNGKSGYVSSKFLSKTSEIDAEKQRQSQEVNKTNDFIQPAAGRYTSRFEKRGGKMHHGLDIAASGTVPVVAAAEGVITR
SYYSTSYGNVVFISHNINGQTYTTVYAHLKSRSVSAGQKVKQGQQLGIMGNTGQSEGQHLHFEIHKGEWNAQKTNAMDPK
IYIG

Specific function: Probably involved in cell-wall metabolism [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=106, Percent_Identity=38.6792452830189, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508
- InterPro:   IPR017293
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01520 Amidase_3; PF08239 SH3_3 [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 61298; Mature: 61298

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ
CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCHHEEECCEEEEECCEEEEEEC
PNTSSTIMGRVYEGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRSK
CCCCCEEEEEEECCEEEEEECCCCCEEEEEECCCCCCEEHHHCCCCCCCCEECCCCCCCH
TVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFVIDGTS
HHHHHHHHEECCCCCCHHEEEEEECCCEEEEEECCCCEEEEEECCEEEEEEEEEEEECCC
NGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQVTGEVQDWVKINY
CCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCEEEEEEE
SGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIG
CCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEEEEEEEEEECCCHHHHHHH
GVLNGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKGNTPSKPETSNPSTEATVGDYY
HHHCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEECEEE
VNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGKINYNGKSGYVSSKFLSKTSEI
EEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCCEEHHHHHHHHCC
DAEKQRQSQEVNKTNDFIQPAAGRYTSRFEKRGGKMHHGLDIAASGTVPVVAAAEGVITR
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCEEEEECCCEEEEEECCCEEEE
SYYSTSYGNVVFISHNINGQTYTTVYAHLKSRSVSAGQKVKQGQQLGIMGNTGQSEGQHL
EEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCEE
HFEIHKGEWNAQKTNAMDPKIYIG
EEEEECCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ
CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCHHEEECCEEEEECCEEEEEEC
PNTSSTIMGRVYEGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRSK
CCCCCEEEEEEECCEEEEEECCCCCEEEEEECCCCCCEEHHHCCCCCCCCEECCCCCCCH
TVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFVIDGTS
HHHHHHHHEECCCCCCHHEEEEEECCCEEEEEECCCCEEEEEECCEEEEEEEEEEEECCC
NGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQVTGEVQDWVKINY
CCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCEEEEEEE
SGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIG
CCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEEEEEEEEEECCCHHHHHHH
GVLNGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKGNTPSKPETSNPSTEATVGDYY
HHHCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEECEEE
VNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGKINYNGKSGYVSSKFLSKTSEI
EEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCCEEHHHHHHHHCC
DAEKQRQSQEVNKTNDFIQPAAGRYTSRFEKRGGKMHHGLDIAASGTVPVVAAAEGVITR
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCEEEEECCCEEEEEECCCEEEE
SYYSTSYGNVVFISHNINGQTYTTVYAHLKSRSVSAGQKVKQGQQLGIMGNTGQSEGQHL
EEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCEE
HFEIHKGEWNAQKTNAMDPKIYIG
EEEEECCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]