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The map label for this gene is ydeD [H]

Identifier: 118477239

GI number: 118477239

Start: 1689443

End: 1690519

Strand: Reverse

Name: ydeD [H]

Synonym: BALH_1546

Alternate gene names: 118477239

Gene position: 1690519-1689443 (Counterclockwise)

Preceding gene: 118477240

Following gene: 118477238

Centisome position: 32.16

GC content: 32.87

Gene sequence:

>1077_bases
TTGAATAATAACTTTACATTAAGTAAGAAATTTCAGTTTATTTTTTATTCATTACATGATATATTGCATATTGTATATAA
TATATTTTCCGAAAGGAGGACTCTATACATGATGGATCCAAATCGTTTAAAAGGAATCATTATGGTTGTCATTGGTGCTT
GTTTATGGGGCTTGTCCGGAACAGCTGCACAACAACTTTTTCAATCTGAACATGTTTCTACTGAATGGTTAGTTACAATC
CGATTACTTATATCTGGAATTATCTTACTCATTATTGCATCATTCGGACCAAGAAAAAAAGAAATATTCGGCATTTGGAA
ACAAAGATCTGATGCTTATAAAATGATATTGTTTGGTTTATTCGGTATGCTTGCTGTACAGTATACGTATTTTGCTTCTA
TTAAAGAAGGAAATGCCGCCGTTGCAACATTATTACAATATTTAGCTCCTATATTCATCACTGTATACTTACTTTTCAAA
TGGAACGTTCGTCCACCAAAAATTGATTTCATTTCAATTACCCTTTCATTAGTAGGTACTTTCCTCTTACTAACAAACGG
GTCTGTGCATAACTTAGCTGTTTCTACACCAGCTATTATTTGGGGGATTTTATCTGGATTATCTCTCGCTTTTTATAGTT
TATATTCAAAGGGATTACTAGAAAGATGGTCTTCCTCTGTTATCGTTGGATGGGGTATGATTATTGGGGGTATTGGTGTA
ACGATTGTACACTTTATTTCTACGAAAGAATTTATTTTATTATCAACTGTGAAATATGTAAAATTAAGTACTCTACCGCT
CATCACATTTGTCGTCATTTTTGGGACACTTATTGCCTTTTATTTATACTTAGACAGCATACGATACTTGACTCCGAAAG
AAACGACATTATTCGGTTGTACTGAACCACTCGCAGCTATTATTTCTTCTGTACTTATATTACATGTACCGTTTCAATCT
TTTCAGTTATTAGGGGCTTTTTGTGTCATTGTAATGGTGCTCATCTTAAGTCAAAAACCAGATGAAGGGAAACCAGAATT
AAAGCTTGTTCATGAGAAAAAGGAAAATATACAATGA

Upstream 100 bases:

>100_bases
TTCCAGCTTTTACTTACACTTCATAATTCAAAATAGAGAGGCTTCCGTTTACGGAAGCCTTTCTATTTTATCGTTCTCTT
ATTTAACAAACTTCTTTCAT

Downstream 100 bases:

>100_bases
AAGGATTGAATTCACTATGCCTATCCCTCAAAATTATAAAAAACAAGGAAGAGTTTCGGCAAAATCACTCGTTTTAAATC
AACTACAAGATTGGATTATT

Product: drug/metabolite exporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNNNFTLSKKFQFIFYSLHDILHIVYNIFSERRTLYMMDPNRLKGIIMVVIGACLWGLSGTAAQQLFQSEHVSTEWLVTI
RLLISGIILLIIASFGPRKKEIFGIWKQRSDAYKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK
WNVRPPKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLLERWSSSVIVGWGMIIGGIGV
TIVHFISTKEFILLSTVKYVKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQS
FQLLGAFCVIVMVLILSQKPDEGKPELKLVHEKKENIQ

Sequences:

>Translated_358_residues
MNNNFTLSKKFQFIFYSLHDILHIVYNIFSERRTLYMMDPNRLKGIIMVVIGACLWGLSGTAAQQLFQSEHVSTEWLVTI
RLLISGIILLIIASFGPRKKEIFGIWKQRSDAYKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK
WNVRPPKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLLERWSSSVIVGWGMIIGGIGV
TIVHFISTKEFILLSTVKYVKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQS
FQLLGAFCVIVMVLILSQKPDEGKPELKLVHEKKENIQ
>Mature_358_residues
MNNNFTLSKKFQFIFYSLHDILHIVYNIFSERRTLYMMDPNRLKGIIMVVIGACLWGLSGTAAQQLFQSEHVSTEWLVTI
RLLISGIILLIIASFGPRKKEIFGIWKQRSDAYKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK
WNVRPPKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLLERWSSSVIVGWGMIIGGIGV
TIVHFISTKEFILLSTVKYVKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQS
FQLLGAFCVIVMVLILSQKPDEGKPELKLVHEKKENIQ

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=313, Percent_Identity=31.9488817891374, Blast_Score=154, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 40272; Mature: 40272

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNFTLSKKFQFIFYSLHDILHIVYNIFSERRTLYMMDPNRLKGIIMVVIGACLWGLSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCC
TAAQQLFQSEHVSTEWLVTIRLLISGIILLIIASFGPRKKEIFGIWKQRSDAYKMILFGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH
FGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFKWNVRPPKIDFISITLSLVGT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
FLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLLERWSSSVIVGWGMIIGGIGV
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
TIVHFISTKEFILLSTVKYVKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGC
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
TEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILSQKPDEGKPELKLVHEKKENIQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MNNNFTLSKKFQFIFYSLHDILHIVYNIFSERRTLYMMDPNRLKGIIMVVIGACLWGLSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCC
TAAQQLFQSEHVSTEWLVTIRLLISGIILLIIASFGPRKKEIFGIWKQRSDAYKMILFGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH
FGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFKWNVRPPKIDFISITLSLVGT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
FLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLLERWSSSVIVGWGMIIGGIGV
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
TIVHFISTKEFILLSTVKYVKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGC
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
TEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILSQKPDEGKPELKLVHEKKENIQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]