Click here to switch to the map view.

The map label for this gene is 117920022

Identifier: 117920022

GI number: 117920022

Start: 1842379

End: 1842645

Strand: Direct

Name: 117920022

Synonym: Shewana3_1574

Alternate gene names: NA

Gene position: 1842379-1842645 (Clockwise)

Preceding gene: 117920021

Following gene: 117920023

Centisome position: 37.05

GC content: 39.33

Gene sequence:

>267_bases
ATGGCATTTGAAAACAACGATAAAGCAAAAGGTTACTGGAATGAGAATTTACGTCTCGTTTTAGGCCTATTGGCTATTTG
GGCCGCAGTCTCATTCGGATGTGGCATTCTATTGGTTGATGTACTCAATGAAATCCATTTCATGGGCTTCAAGTTAGGTT
TCTGGTTTGCTCAACAGGGATCTATGTATGTCTTTGTTGCGCTTATTTTTGTCTACGCGGCAAAAGCCAACGCCTTAGAT
AAAAAATATAACGTACAAGAAGACTAA

Upstream 100 bases:

>100_bases
TGAGCCGCTTCGCAAATTAGACTAAGGTCTTGATTGTGGTCACTCCAGCTGTTGCTAGATTTAACAAGACTTAAAAATAA
AACAGCACAGGGGAGTCGCT

Downstream 100 bases:

>100_bases
GGAGAACGGAAATGGGTGTACAAGGATTAACTTATCTGATTGTGGGGCTGTCGTTCGCGCTCTACATTGGGATCGCGATT
TGGTCCCGTGCGGGTTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAFENNDKAKGYWNENLRLVLGLLAIWAAVSFGCGILLVDVLNEIHFMGFKLGFWFAQQGSMYVFVALIFVYAAKANALD
KKYNVQED

Sequences:

>Translated_88_residues
MAFENNDKAKGYWNENLRLVLGLLAIWAAVSFGCGILLVDVLNEIHFMGFKLGFWFAQQGSMYVFVALIFVYAAKANALD
KKYNVQED
>Mature_87_residues
AFENNDKAKGYWNENLRLVLGLLAIWAAVSFGCGILLVDVLNEIHFMGFKLGFWFAQQGSMYVFVALIFVYAAKANALDK
KYNVQED

Specific function: Unknown

COG id: COG4327

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9972; Mature: 9841

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFENNDKAKGYWNENLRLVLGLLAIWAAVSFGCGILLVDVLNEIHFMGFKLGFWFAQQG
CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCC
SMYVFVALIFVYAAKANALDKKYNVQED
CHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AFENNDKAKGYWNENLRLVLGLLAIWAAVSFGCGILLVDVLNEIHFMGFKLGFWFAQQG
CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCC
SMYVFVALIFVYAAKANALDKKYNVQED
CHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA