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The map label for this gene is yjcG [C]

Identifier: 117920023

GI number: 117920023

Start: 1842657

End: 1844393

Strand: Direct

Name: yjcG [C]

Synonym: Shewana3_1575

Alternate gene names: 117920023

Gene position: 1842657-1844393 (Clockwise)

Preceding gene: 117920022

Following gene: 117920024

Centisome position: 37.06

GC content: 50.26

Gene sequence:

>1737_bases
ATGGGTGTACAAGGATTAACTTATCTGATTGTGGGGCTGTCGTTCGCGCTCTACATTGGGATCGCGATTTGGTCCCGTGC
GGGTTCGACTAAAGAGTTTTATGTTGCGGGTGGCGGTGTTCACCCTGTAGTGAACGGTATGGCGACTGCAGCCGACTGGA
TGTCAGCAGCATCCTTTATTTCGTTAGCGGGTATTGTCTCTTTCGTCGGTTACGACGGCAGTGTGTACCTGATGGGCTGG
ACGGGCGGTTACGTATTATTAGCCCTGTGTATGGCGCCGTACTTACGTAAATTTGGTAAGTTCACTGTGCCTGATTTCGT
GGGTGAGCGTTACTACTCGCAAGCGGCGCGTACGGTCGCGGTTATTTGCGCTATCTTCATCTGCTTTACTTACATCGCGG
GCCAAATGCGCGGTGTGGGCGTGGTTTTCTCGCGCTTCCTCGAAGTGGATGTGGACACTGGCGTGTATATCGGTATGGCT
GTGGTGTTCTTCTACGCGGTGCTCGGCGGTATGAAGGGTATTACCTATACTCAGGTTGCCCAATACTGCGTACTGATTTT
CGCCTTTATGGTGCCAGCAATCTTCTTATCTGTGATGATGACGGGTCATATCATTCCTCAAATTGGTTTCGGTGCTCAGT
TACTTGATGCTGCGGGGAATAACTCTGGCGTTTATCTGTTAGAGAAACTGAACAATCTGTCTGTGGATTTAGGCTTTGCT
CCTTATACCGATGGCTCTAAGAGCATGATCGACGTGTTCTGTATTACTGGCGCTTTGATGGTGGGTACTGCGGGCTTACC
CCACGTTATCGTGCGTTTCTTTACTGTTCCTAAAGTGAAAGATGCGCGTGTATCAGCCGGTTGGGCGCTGGTGTTTATCG
CCATCATGTACACCACAGTTCCTGCATTGGCGGCATTCTCTCGCGTCAATATGATCGAAACCATTAACGGTCCAGATCAA
AAGGGTGTTGCCTATGAAACTGCGCCAGATTGGATCAAAAACTGGGAAAAAACCGGTCTGATCAAATGGGATGACAAAAA
CGGCGACGGCAAAATCTACTATGCCAAAGGCAAAATGGAAGATGCTGCTAGCCCTAACGAAATGAAGATCGACAACGACA
TCATCGTATTAGCAACGCCAGAAATCGCGAATCTGCCAGCTTGGGTTATCGCACTGGTAGCTGCGGGTGGTTTAGCAGCG
GCGTTATCTACCTCTGCGGGTCTGTTACTGGTTATCTCGACTTCAGTATCACACGACTTACTGAAGAAGAACCTGATGCC
AAATATCTCTGACAAGAAAGAGCTGATGTACGCTCGACTGGCAGCCGGTATCGGCATCGTGATTGCGGGTTACTTCGGGG
TTAACCCACCAGGATTCGTGGCAGCGGTAGTGGCGTTCGCCTTTGGTCTGGCGGCATCCTCTCTGTTCCCAGCCATCATC
ATGGGTATCTTCTCTAAGACGATGAACAAAGAAGGTGCAATCGCAGGTATGGTTATCGGTCTACTGTTCACTGCGGGTTA
CATCATCTACTTCAAGTTTGTGGACCCAACAGCTAACGTGGCGGCTAACTGGTTCCTCGGTATTTCGCCAGAAGGTATCG
GTATGGTCGGTATGGTGGTGAACTTTGCGGTGGCGGCTATCGTCTGTAAGGTGACCGCAGCGGCACCTGCCCATGTACAA
GATATGGTTGAATCTATCCGTTTCCCTAAAGGGGCGGGAGAAGCGAGCAGCCATTAA

Upstream 100 bases:

>100_bases
GATCTATGTATGTCTTTGTTGCGCTTATTTTTGTCTACGCGGCAAAAGCCAACGCCTTAGATAAAAAATATAACGTACAA
GAAGACTAAGGAGAACGGAA

Downstream 100 bases:

>100_bases
TCACTGCTGGGTTTAGCTAAGCTAAATTAAGATAAAAGGACGCATTAGCGTCCTTTTGTTTTAATGGGGTCAGCGCAAGC
TTAAGGCTGACTTTAGTCGT

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MGVQGLTYLIVGLSFALYIGIAIWSRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW
TGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVAVICAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMA
VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFLSVMMTGHIIPQIGFGAQLLDAAGNNSGVYLLEKLNNLSVDLGFA
PYTDGSKSMIDVFCITGALMVGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTVPALAAFSRVNMIETINGPDQ
KGVAYETAPDWIKNWEKTGLIKWDDKNGDGKIYYAKGKMEDAASPNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAA
ALSTSAGLLLVISTSVSHDLLKKNLMPNISDKKELMYARLAAGIGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII
MGIFSKTMNKEGAIAGMVIGLLFTAGYIIYFKFVDPTANVAANWFLGISPEGIGMVGMVVNFAVAAIVCKVTAAAPAHVQ
DMVESIRFPKGAGEASSH

Sequences:

>Translated_578_residues
MGVQGLTYLIVGLSFALYIGIAIWSRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW
TGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVAVICAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMA
VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFLSVMMTGHIIPQIGFGAQLLDAAGNNSGVYLLEKLNNLSVDLGFA
PYTDGSKSMIDVFCITGALMVGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTVPALAAFSRVNMIETINGPDQ
KGVAYETAPDWIKNWEKTGLIKWDDKNGDGKIYYAKGKMEDAASPNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAA
ALSTSAGLLLVISTSVSHDLLKKNLMPNISDKKELMYARLAAGIGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII
MGIFSKTMNKEGAIAGMVIGLLFTAGYIIYFKFVDPTANVAANWFLGISPEGIGMVGMVVNFAVAAIVCKVTAAAPAHVQ
DMVESIRFPKGAGEASSH
>Mature_577_residues
GVQGLTYLIVGLSFALYIGIAIWSRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGWT
GGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVAVICAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMAV
VFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFLSVMMTGHIIPQIGFGAQLLDAAGNNSGVYLLEKLNNLSVDLGFAP
YTDGSKSMIDVFCITGALMVGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTVPALAAFSRVNMIETINGPDQK
GVAYETAPDWIKNWEKTGLIKWDDKNGDGKIYYAKGKMEDAASPNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAAA
LSTSAGLLLVISTSVSHDLLKKNLMPNISDKKELMYARLAAGIGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAIIM
GIFSKTMNKEGAIAGMVIGLLFTAGYIIYFKFVDPTANVAANWFLGISPEGIGMVGMVVNFAVAAIVCKVTAAAPAHVQD
MVESIRFPKGAGEASSH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=290, Percent_Identity=28.6206896551724, Blast_Score=116, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 61287; Mature: 61156

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GVQGLTYLIVGLSFALYIGIAIWSRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]