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The map label for this gene is yggT [C]

Identifier: 117919641

GI number: 117919641

Start: 1399561

End: 1400109

Strand: Reverse

Name: yggT [C]

Synonym: Shewana3_1192

Alternate gene names: 117919641

Gene position: 1400109-1399561 (Counterclockwise)

Preceding gene: 117919642

Following gene: 117919640

Centisome position: 28.16

GC content: 45.17

Gene sequence:

>549_bases
ATGAATGCATTAACCTTTTTGATCAGCACACTCTTCGATTTGTATTTGATGGTGGTGATATTACGGATCTGGCTCCCCTT
GGCCCGTGCCGATTTTTATAATCCCTTCAGTCAGTTTGTGGTCAAAGCCACTCACCCGTTGATCGCACCTATGCGTCGAT
TAATTCCTTCAATGGGAAGATTCGACACTTCTTCATTTGTGCTCGCCCTATTAGTGGTGATGGTCAAAGTGCTGCTGATA
AGTCTTATTGCCGGCGGCGGTATTGATATAGTGCTGTTCTTTGTGTTTGCGCTTGTTACTGTCATCAAGCAGGCGGGCAT
TTTGCTCTTCTGGATGCTGATCATTCGTGCAATTTTAAGCTGGTTCAATCAAGGCTATAACCCCATTGTGATGATCATGG
GACAACTAACAGAGCCCATTTTAGCACCAGTGCGCCGCATTATTCCGCCCATTGGTGGCTTAGATCTGTCGGTGATGTTA
GTGATTATCGGCATGAACTTTATCAACATGCTGTTGGCGCAATACGTACCATTTTGGGCCGTGATTTAA

Upstream 100 bases:

>100_bases
AGAGGAAATGGCCAATACTTTTTGATCCAGCAATGGCTGGGTGACTCACTCACTTTTAACGCGGGCGTTTTTAATCGGAC
TCATATAGGCAGAAATCTCG

Downstream 100 bases:

>100_bases
TGAGCGCAGTCATTATGCAGCAAGGTGACTTGCTGCTTAATTTGTATATTCAACCCAAAGCGAGTCGCGATCAGATAGTT
GGGCTACACGGTGATGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNALTFLISTLFDLYLMVVILRIWLPLARADFYNPFSQFVVKATHPLIAPMRRLIPSMGRFDTSSFVLALLVVMVKVLLI
SLIAGGGIDIVLFFVFALVTVIKQAGILLFWMLIIRAILSWFNQGYNPIVMIMGQLTEPILAPVRRIIPPIGGLDLSVML
VIIGMNFINMLLAQYVPFWAVI

Sequences:

>Translated_182_residues
MNALTFLISTLFDLYLMVVILRIWLPLARADFYNPFSQFVVKATHPLIAPMRRLIPSMGRFDTSSFVLALLVVMVKVLLI
SLIAGGGIDIVLFFVFALVTVIKQAGILLFWMLIIRAILSWFNQGYNPIVMIMGQLTEPILAPVRRIIPPIGGLDLSVML
VIIGMNFINMLLAQYVPFWAVI
>Mature_182_residues
MNALTFLISTLFDLYLMVVILRIWLPLARADFYNPFSQFVVKATHPLIAPMRRLIPSMGRFDTSSFVLALLVVMVKVLLI
SLIAGGGIDIVLFFVFALVTVIKQAGILLFWMLIIRAILSWFNQGYNPIVMIMGQLTEPILAPVRRIIPPIGGLDLSVML
VIIGMNFINMLLAQYVPFWAVI

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=178, Percent_Identity=43.2584269662921, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20468; Mature: 20468

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALTFLISTLFDLYLMVVILRIWLPLARADFYNPFSQFVVKATHPLIAPMRRLIPSMGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FDTSSFVLALLVVMVKVLLISLIAGGGIDIVLFFVFALVTVIKQAGILLFWMLIIRAILS
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFNQGYNPIVMIMGQLTEPILAPVRRIIPPIGGLDLSVMLVIIGMNFINMLLAQYVPFWA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VI
CC
>Mature Secondary Structure
MNALTFLISTLFDLYLMVVILRIWLPLARADFYNPFSQFVVKATHPLIAPMRRLIPSMGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FDTSSFVLALLVVMVKVLLISLIAGGGIDIVLFFVFALVTVIKQAGILLFWMLIIRAILS
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFNQGYNPIVMIMGQLTEPILAPVRRIIPPIGGLDLSVMLVIIGMNFINMLLAQYVPFWA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]